Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0371 ATGCCTCACAGAACCACATACATTTTCCCGCGTCAATTCCCGGAGCGAGGGTTGGATGAATCTACCAAACAGCTATTAGATCATGAGAAAAAGAAAATCGTCAACTCAATCAAACATGACACGTTGAGCGTCGAAAGCGGCACTCCGAAAAAACCGCTTCTGATTAAAGACAACGACGTCGTTCTCTCCTCCGCTGAGCACTCCGCCGTCTCCGACCTGTTCGCCGCCGGCGACAAGTTTCGGACCAAACACAAGCAAATCGCTGCGTTCTGCGATTGGCTGATCGACAACAAAGTCAGCCACTCCAGCCACCACTGCGACGGCGACCTACTTCTTCAGCCCGAAACCACCGTCAAGGACGCTGCCGTTGACCAGAGCTTCGACCGGCAGGTTTCGCTGCCGAGGCTATCAAGCGGGAGCAGCTATGCTGGAAGCTTGTTTTCGGGGACGACGTTTGATTGCAATTTTTCCAGCGACATTAAGGAGGAAACGTCGTCGTCTCGCACACTCACTACTATCGCTGCGCCGAGGCACAAGGATGAGGAGGAAGAACAGGTCACGGAGAAGTTGGCCAAGAAGTCGAAAGAGAGCTACATCTTGCAACTCACGTTAGCGAGGAGGCTCAACTGTTTGGCTAGCCTCGTCACTGAACCTGTTCTCACTCCAGGAACCGAAACCTGGGATGCTGAATCCGTTTCTTATCGCCTATGGGTGAGTGGATGTTTATCTTACACGGACAAGATATCTGACGGGTTTTATAACATATTGGGGATGAATCCATATCTTTGGGTGATGTGTAATGATGTCGAAGAAGGTAGAAGGATACCTACTTTGATGGCGCTAAAAGCGGTTGAGCCCAGCGAAACTTGTATGGAGGTGGTGCTTGTTGATAGACGCGAGGACTCTCGCTTGAAGCTGCTACAAGATAAGGCGCAAGAGTTGTATTGTGCTTCTGAGAACACCTTGGTGTTAGTGGAACAACTAGGGAAACTGGTAGCCATTTGTATGGGGGGTATGTTTCCGGTGGAGCAAGGCGATCTTCACAAGCGCTGGAAGTTGGTTAGTAAGAAGTTGAGGAATTTTCACAAGTGTGTTGTGCTTCCCATTGGCAGCCTGTCTACTGGGCTTTGTAGGCATCGGGCAATTCTTTTTAAGAGATTGGCAGATTACATAGGTTTGCCCTGTCGTATAGCTCGTGGTTGCAAGTACTGTGTTGCAGATCATAGATCCTCTTGTCTAGTCAAAATTAAAGATGACAGACAGCTCTCAAGGGAGTATGTGGTCGACCTAGTTGGGGAACCAGGAAATGTCCATGGACCAGATTCCTCAATAAATGGAGCATATGTTTCTTCAATGCCTTCCCCGTTTCAAATTTGTCACTTAAAAGAATCACAATCACCTTATATGGAGGACATAGCAAGTTCTGAATCTGTAGGTTCCAATAACAGAACTGTTAATCCTGAAAATCTTCCATATTCAGGCTGCGGAAATAATGATCAACAAGCTAAAGAAACTGATTTGCCAAGAAGTTCCATTTATGCTTCAGTTGATCAAATCTGTGAAGTTACAGAACCATCTCCAATTCCTTCTGGATTCGAAGGGAATGAGGATGAATGTGCAGTTCTTAGTTCGGTTTTGCCTACCATCCATGAAGATGATTCTAAAGCTCTTCATCCAGCCATCGAAGCATCACTACATGAATATCCAAGCGTTAGCGAAGATGTAGTACAAGTACAAGAAATTTCCAACAATGAGATCATTGTAAATGGAAGTTCTGTGGTGAAAAGTAGTTTCAAGCGATCTATACTTGGTTCATCCAGCCAGTCAGAACTGAAACAGGTAGACAATATAATTGAAAACAAGGGTTGTTTACCTGCAGGGAATATTCCAAGATATGTAAATCTTGAACCATCACTTGCCATGGACTGGCTTGAGATATCATGGGAGGATTTACGAATTAAAGAGCGTGTTGGTGCTGGTTCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCGGATGTTGCAGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGGGTTCGCCATCCAAATGTGGTGTTATTCATGGGGTCTGTTACAAAACGCCCCCATCTATCAATAGTGACAGAATATTTGCCCAGGGGTAGTTTATACCGCTTGCTATACAGACCAGCATCTGGTGAAATTCTGGATAAGAGGAGGAGGCTACGGATGGCTTTGGATGTGGCTAGAGGAATCAATTATCTCCACTGTCTTAAACCTCCAATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAAAAATTGGACTGTGAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTGCATACCATCCAAATCAGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCCTCCAATGAGAAATCTGACGTATACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCATGAAACAGCCATGGAGTGGACTTAGTCCTGCCCAGGTGGTTGGAGCTGTTGCCTTCCAGAACAGGAGGCTTGCTATCCCTACAAACATCTCCCAAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCCGATGACCCTAGTGAGCGGCCATCATTTGGTAGCATAGTTGAGTCACTAAAGAAGCTGGTAAAATCTCCGGCAGAATCTATAAACATGGGAGATACATAG 2766 0.4581 MPHRTTYIFPRQFPERGLDESTKQLLDHEKKKIVNSIKHDTLSVESGTPKKPLLIKDNDVVLSSAEHSAVSDLFAAGDKFRTKHKQIAAFCDWLIDNKVSHSSHHCDGDLLLQPETTVKDAAVDQSFDRQVSLPRLSSGSSYAGSLFSGTTFDCNFSSDIKEETSSSRTLTTIAAPRHKDEEEEQVTEKLAKKSKESYILQLTLARRLNCLASLVTEPVLTPGTETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEGRRIPTLMALKAVEPSETCMEVVLVDRREDSRLKLLQDKAQELYCASENTLVLVEQLGKLVAICMGGMFPVEQGDLHKRWKLVSKKLRNFHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCVADHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPDSSINGAYVSSMPSPFQICHLKESQSPYMEDIASSESVGSNNRTVNPENLPYSGCGNNDQQAKETDLPRSSIYASVDQICEVTEPSPIPSGFEGNEDECAVLSSVLPTIHEDDSKALHPAIEASLHEYPSVSEDVVQVQEISNNEIIVNGSSVVKSSFKRSILGSSSQSELKQVDNIIENKGCLPAGNIPRYVNLEPSLAMDWLEISWEDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGSVTKRPHLSIVTEYLPRGSLYRLLYRPASGEILDKRRRLRMALDVARGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTCIPSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMKQPWSGLSPAQVVGAVAFQNRRLAIPTNISQALASLMESCWADDPSERPSFGSIVESLKKLVKSPAESINMGDT* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0371 921 SUPERFAMILY Protein kinase-like (PK-like) 629 904 IPR011009 -
Pvu9g0371 921 PRINTS Tyrosine kinase catalytic domain signature 725 738 IPR001245 GO:0004672|GO:0006468
Pvu9g0371 921 PRINTS Tyrosine kinase catalytic domain signature 766 784 IPR001245 GO:0004672|GO:0006468
Pvu9g0371 921 PRINTS Tyrosine kinase catalytic domain signature 832 854 IPR001245 GO:0004672|GO:0006468
Pvu9g0371 921 PRINTS Tyrosine kinase catalytic domain signature 876 898 IPR001245 GO:0004672|GO:0006468
Pvu9g0371 921 ProSiteProfiles Protein kinase domain profile. 651 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0371 921 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 115 919 - -
Pvu9g0371 921 CDD STKc_MAP3K-like 657 905 - -
Pvu9g0371 921 SMART serkin_6 651 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0371 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Pvu9g0371 921 ProSitePatterns Protein kinases ATP-binding region signature. 657 678 IPR017441 GO:0005524
Pvu9g0371 921 Gene3D Transferase(Phosphotransferase) domain 1 730 918 - -
Pvu9g0371 921 Gene3D Phosphorylase Kinase; domain 1 644 728 - -
Pvu9g0371 921 Pfam Ethylene-responsive protein kinase Le-CTR1 229 437 - -
Pvu9g0371 921 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 115 919 - -
Pvu9g0371 921 Pfam Protein tyrosine and serine/threonine kinase 651 905 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0371 Pvu-Chr9 7621800 7629362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0371 1 919 MAP Kinase Kinase Kinase AT4G24480 56.020 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pvu9g0371 PK_Tyr_Ser-Thr 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0371 - - gmx:100808435 1618.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1894 8 48241941 48248025 Pvu9g0371 9 7621800 7629362 PCT
Pvu8g1971 8 49551617 49558292 Pvu9g0371 9 7621800 7629362 PCT