Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0336 ATGGAGTCTCAGAGAGATCGCAGGACAGAAGCTCTTGGAGACCTTCGAGTCCTTTCCGATGAAATCCTCTGCGCTATTCTGGAACGTTTCACTCCGCGAGATGTTGCTCGCGTTGCTTGTGTTAGCAGTGTGATGTACACACTGTGCAACGAAGAACCTCTGTGGATGAGTCTATGCCTAAAAGGAACGTCTGGTTCGCTTCAATACAAAGGCTCTTGGAAGAAAACTGTTCTGCATAATTTGAATCTGCCCGACAAATACAAAGAATACCATCGAGGACCTTTATATTTTGATGGGTTCAACTCTTTATTTTTGTACAGGAGATTATACCGCTGTCATACCACATTGGGTGCATTTCATGCAGATACTGGAAATGTGCAAAGAATAAAAGACATCTCATTGAAGGAATTCTATAATGAGTATGATGCAAAGAAACCGGTTATGCTCAGTGGATTGGCTGATACATGGCCCGCCAGGCATAAATGGACAACTGATCAGCTGTTGCTAAACTATGGAGATGTAGCATTTAAAATTTCTCAACGGGGTGCCCGAAAGGTCTCCATGAAGTTCAAGGATTATGTCTCTTACATGAAAGTTCAGCATGATGAAGATCCCTTGTATATTTTTGATGAAAAGTTTGGTGAAACTGCACCTAGCTTATTGAAGGATTATTGTGTGCCTCATCTTTTTGAAGAAGACTTCTTTGATATCTTAGATACAGATAAAAGACCATCCTATAGGTGGTTCATAATTGGACCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACCAGCGCATGGAATACTCTTCTTTGTGGGCGTAAAAGGTGGGCATTATATCCTCCAGGAAAAGTGCCTTTGGGTGTGACAGTTCATGTTAATGAAGAAGACGGTGATGTCAATGTTGAGACTCCATCATCACTGCAGTGGTGGCTAGATTTTTATCCTCTTCTTGCTGAAGAAGACAAGCCAATTGAGTGTACACAGCTACCTGGAGAAACAATTTATGTTCCGAGTGGATGGTGGCACTGCGTACTAAATTTGGAAACAACTATTGCTGTCACGCAGAATTTTGTGAATTCCAACAATTTTGAATTTGTATGCTTGGATATGGCACCTGGTTATCATCATAAAGGAGTTTGCCGTGTTGGGTTGCTTGCTCTTGATGAAGATGGTTATGAAAATGTCAGACAGAACATGCCATGTAATGAAAAGAACTCAAGTTACAATGATTTGTTAAGGAAAGAAAAAAGAGCCAAAATTCAGAAAGATGCAGATGGTCTAAATGATGAAAGAGCCATAAATGGTGTATCTAGAAGTTACAATTTATGGAAAGATGGATTTTCGTATGATATAAACTTCTTATCCATGTTTTTGGATAAAGACAGAGACCACTACAGTGCCCTGTGGAGCTCAGGGAACAGCATTGGTCAACGAGAACTAAGAGAATGGCTATCCAAGCTCTGGATTCAAAAACCAAAATTAAGAGAGCTAATATGGAAGGGAGCATGTATTGCACTAAACGCCAACAAGTGGTTAGAATGCCTATCAAAAATTTGTGTCTTCCATAATTTGCCCCCTCCCACTGACGATGAAAGGCTTCCAGTTGGTACGGGTAGCAATCCTGTTTATTTAGTGGGAAACTCTGTTGTTAAGATTTTTGTTGAAGGAGGACTGGAAGCTTCACTTTATGGTTTAGGCACAGAGCTAGAGTTTCAGAGTCGGTTGCGTGAAGCCAACTCCCCACTTAGTAAACATATACCTGATGTTTTGGCCAGTGGAATTATTTATCTTGAAAATGGATCTTGTACCAATTTAAGTTGGGATGGAAAAGGAGTACCTGATGTCATTGTGAAAAGCAATATCATCAGTAGGAAATGCAGTGTTGATGATTTCTCATTTGGGGTGTGGGGCAGGAAACAATTAGAGTATAGGAATGCTGGGATACCTGTGGATGGATCAGGTAGCTTAGCTGGTAACTCAAACATATGGCCGTATGTGATAACAAAACGATGTGAAGGGAATATATTTGCAGAATTAAGAGATAAACTGACATGGGAAGATACGACAAACTTGGCCTCATTCTTGGGCGAGCAACTGAATTATCTTCATCTTTTGTCATATCCACCTCCAAATATCTCATCTTTCTCTGATATTGATCATGAATTAAGCTTGGTTGGGGCTAATGGTTGCATTGCAACTGTTAACAGTAAATCAAATGTTACAGCAGAATGGTGGCTCTTCACCAGAACCTTAACAAAGATGAGGAAAGACCTGTCAAGCCGTTTGACCAAGTGGGGAGATCCAATTCCTTGCAAACTGATAGAGAAGATTGATGAATATATCCCACCTGATTTTGCGGAGAATTTTGGAAACTATGCTTGTAAACACTGCTCCTGGATACACACGGACGTTATGGATGATAATATTTGCATGAAACCATCAATGGTTTGCTCTACCACTGCTGGGAATAATGAAGATATCACCATTGTGGACAATGGTTTGTTGAGTAATTATGAAGTAAAATCATGGTGTCCTAGTCACATTCTTGACTTTAGTGATCTTTCCATAGGTGATCCTCTTGTTGACTTGATACCAATTTATTTAGATGTGTTTAGAGGTGATTCACGTCTCCTCAAGAAATTTTTAGAAAGTTATAAACTTCCCTTTGTTAGTGAGGTATCAAGGTGGGAGTCAACAGAGGGTGATCAAAAGTTTGGCCGACTTTCATACCTTGCCATGTGTTATTGTATCTTGCATCATGACAATGTATTGGGAGCTCTTTTTAGCTTATGGGAAGAACTGAGGTCAGCAAAGTCATGGGAAGAAGTGGAACTGGCAGTGTGGGGGGAACTGAACAATTACAAAGGCTTTCCGTGA 2889 0.4046 MESQRDRRTEALGDLRVLSDEILCAILERFTPRDVARVACVSSVMYTLCNEEPLWMSLCLKGTSGSLQYKGSWKKTVLHNLNLPDKYKEYHRGPLYFDGFNSLFLYRRLYRCHTTLGAFHADTGNVQRIKDISLKEFYNEYDAKKPVMLSGLADTWPARHKWTTDQLLLNYGDVAFKISQRGARKVSMKFKDYVSYMKVQHDEDPLYIFDEKFGETAPSLLKDYCVPHLFEEDFFDILDTDKRPSYRWFIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNEEDGDVNVETPSSLQWWLDFYPLLAEEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSNNFEFVCLDMAPGYHHKGVCRVGLLALDEDGYENVRQNMPCNEKNSSYNDLLRKEKRAKIQKDADGLNDERAINGVSRSYNLWKDGFSYDINFLSMFLDKDRDHYSALWSSGNSIGQRELREWLSKLWIQKPKLRELIWKGACIALNANKWLECLSKICVFHNLPPPTDDERLPVGTGSNPVYLVGNSVVKIFVEGGLEASLYGLGTELEFQSRLREANSPLSKHIPDVLASGIIYLENGSCTNLSWDGKGVPDVIVKSNIISRKCSVDDFSFGVWGRKQLEYRNAGIPVDGSGSLAGNSNIWPYVITKRCEGNIFAELRDKLTWEDTTNLASFLGEQLNYLHLLSYPPPNISSFSDIDHELSLVGANGCIATVNSKSNVTAEWWLFTRTLTKMRKDLSSRLTKWGDPIPCKLIEKIDEYIPPDFAENFGNYACKHCSWIHTDVMDDNICMKPSMVCSTTAGNNEDITIVDNGLLSNYEVKSWCPSHILDFSDLSIGDPLVDLIPIYLDVFRGDSRLLKKFLESYKLPFVSEVSRWESTEGDQKFGRLSYLAMCYCILHHDNVLGALFSLWEELRSAKSWEEVELAVWGELNNYKGFP* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0336 962 PANTHER JMJC DOMAIN-CONTAINING PROTEIN 8 4 895 - -
Pvu9g0336 962 Gene3D - 5 89 - -
Pvu9g0336 962 SUPERFAMILY Clavaminate synthase-like 119 370 - -
Pvu9g0336 962 Pfam F-box-like 20 61 IPR001810 GO:0005515
Pvu9g0336 962 Pfam Cupin-like domain 142 365 IPR041667 -
Pvu9g0336 962 ProSiteProfiles JmjC domain profile. 215 378 IPR003347 -
Pvu9g0336 962 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 4 895 - -
Pvu9g0336 962 Gene3D Cupin 112 363 - -
Pvu9g0336 962 SUPERFAMILY F-box domain 5 64 IPR036047 GO:0005515
Pvu9g0336 962 SUPERFAMILY Protein kinase-like (PK-like) 667 896 IPR011009 -
Pvu9g0336 962 SMART cupin_9 210 373 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0336 Pvu-Chr9 7106197 7116550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0336 4 958 Glycosyltransferase AT1G78280 60.453 0.0 1194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pvu9g0336 Cupin_8 2.4e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0336 - - gmx:100792541 1771.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0336 9 7106197 7116550 Pvu9g0336 9 7106197 7116550 ECH