Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0323 ATGGGAAGATCTCCATGCTGCGATGAGAATGGCCTTAAGAAAGGTCCCTGGACTCCCGAAGAAGATCAAAAGCTGGTTCAGCACATTGAGAAACATGGCCATGGAAGTTGGAGAGCTCTCCCTAAGCTAGCCGGTCTCAACAGATGTGGAAAAAGTTGTAGGCTAAGGTGGACTAACTATTTAAGGCCTGATATCAAGAGGGGCAAATTTTCTCAAGAAGAGGAGCAAACAATTCTGCATCTCCATTCTATCCTTGGAAACAAATGGTCAGCAATTGCGACCCACCTTCCTGGAAGGACGGATAATGAGATCAAGAATTTCTGGAATACTCATTTAAAGAAAAAGTTGATTCAGATGGGTTTTGATCCAATGACTCACCAACCTAGAACTGACCTTGTTTCCAGCTTGCCATATCTGCTAGCTTTGGCCAACATGACAGACCTTGTGGATCATCAATCATTGGATGAACATGCTATGATGTTGCAAGCAGAGGCAGTCCAGCTGGCAAAGCTTCAATACCTTCATCATCTAATCCAATCCTCAAACTCCTTAAGCTCCAACTACTATGACCAAAATGCCACCACAAACAACATGAACAACATGGAACCTTTCACTTTGTTAAACTCAGTCTCCAATGTGAAAGAGAATACAGTCATATCGCAACCGGATGCTCCTGCCTCATTTTCTCATGGCATTGCTAGTTCTCAACCACTCCACCACCAAAACGTGCTACCTCACCTTTTAGACCCACAAGTCTCTTTCAGTTCTCAATCATGTTTGAATAGTGAGATGAGTCAAGGTACTGACTTTGCAATGATAAGTCAAGGGGATCACACGGTTGATCATCACTCTTCATGGATTATTCCATCTATTCCTCCGAATGCAATAGGTACATCAGCTAGCAATCCAGGAGATGCCAGCAGCAGCACTTCTAGCTATGGAGGAGGACCCCCATCTTATTGGCCTGAACTATTTTTTGAGGACCCCATCATGCCTGAGCTATCTTAG 1008 0.4395 MGRSPCCDENGLKKGPWTPEEDQKLVQHIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSSLPYLLALANMTDLVDHQSLDEHAMMLQAEAVQLAKLQYLHHLIQSSNSLSSNYYDQNATTNNMNNMEPFTLLNSVSNVKENTVISQPDAPASFSHGIASSQPLHHQNVLPHLLDPQVSFSSQSCLNSEMSQGTDFAMISQGDHTVDHHSSWIIPSIPPNAIGTSASNPGDASSSTSSYGGGPPSYWPELFFEDPIMPELS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0323 335 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu9g0323 335 CDD SANT 69 112 IPR001005 -
Pvu9g0323 335 Gene3D - 11 67 - -
Pvu9g0323 335 CDD SANT 16 61 IPR001005 -
Pvu9g0323 335 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pvu9g0323 335 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu9g0323 335 MobiDBLite consensus disorder prediction 291 315 - -
Pvu9g0323 335 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 261 - -
Pvu9g0323 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 261 - -
Pvu9g0323 335 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pvu9g0323 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pvu9g0323 335 SMART sant 66 114 IPR001005 -
Pvu9g0323 335 SMART sant 13 63 IPR001005 -
Pvu9g0323 335 Gene3D - 69 116 - -
Pvu9g0323 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pvu9g0323 335 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0323 Pvu-Chr9 6857636 6859147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0323 1 335 MYB Transcription Factor Family AT1G34670 54.090 2.48e-118 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu9g0323 Myb_DNA-binding 6.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0323 K09422 - gmx:100782792 583.178