Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0308 ATGGCTGTGCTTAGCGGGTTTTGGGGCCTGCCCCATAAGAATCTTGTGAAAAGGTTGGAAGGAGCTAAAGTTGGTGCTTGGATTGATTCAATGAGAGCCTCTTCCCCAACTCGTGGCAAATCAGAAAGCCAAGAAAAAAGATCTTGGATTCTTTATCACCCTTCAGCTCTGAATACCTTTGAGCAAATAACATATAATTCCAAAGGCAAACAGATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCCCCTATAGTCACAGATCCGGATAAAGCTTTCATGAGCAGAAAGATGAGAGCGACGCTTAAGGGAATCGCAAGACATTTTCCCACAGCAATCGTGACCGGGAGGTGCAGGGACAAGGTCTATAACTTTGTAAAACTGGGAGAACTTTACTATGCCGGGAGCCATGGCATGGACATCAAGGGGCCAACAAAAAGCCGAAGTGGAAAGCAAGGTAACAATAAAGGTGTACTGTTCCAACCCGCGAGTCAATTCCTGCCCATGATCGATGAGGTGTACAAGATCTTGTTAGAAAGAACAAAGTCTGTCCCAGGGGCTAAGGTCGAGAACAATAAGTTTTGCTTGTCCGTTCACTTTCGTTGTGTTGACGAAAAGAGTTGGGCATCCTTGGCGGACAAAGTTAGATTGGTGCTCAATGACTACCCACACCTTAAGCTAACCCAAGGAAGAAAAGTGCTAGAGATTCGTCCAACCATCAAATGGGACAAGGGCAAGGCTCTTGAATTTTTGTTAGAATCATTAGGATACGAGAATTCGAATGATGTATTTCCAATCTATATTGGAGATGATCGAACTGATGAGGATGCTTTTAAGGTTTTGCGTAGTAGGGGTCAAGGAATTGGGATACTT 873 0.4399 MAVLSGFWGLPHKNLVKRLEGAKVGAWIDSMRASSPTRGKSESQEKRSWILYHPSALNTFEQITYNSKGKQIVVFLDYDGTLSPIVTDPDKAFMSRKMRATLKGIARHFPTAIVTGRCRDKVYNFVKLGELYYAGSHGMDIKGPTKSRSGKQGNNKGVLFQPASQFLPMIDEVYKILLERTKSVPGAKVENNKFCLSVHFRCVDEKSWASLADKVRLVLNDYPHLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRSRGQGIGIL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0308 291 TIGRFAM T6PP: trehalose-phosphatase 70 284 IPR003337 GO:0003824|GO:0005992
Pvu9g0308 291 Gene3D - 74 288 IPR023214 -
Pvu9g0308 291 Gene3D - 163 239 - -
Pvu9g0308 291 Pfam Trehalose-phosphatase 75 289 IPR003337 GO:0003824|GO:0005992
Pvu9g0308 291 SUPERFAMILY HAD-like 73 289 IPR036412 -
Pvu9g0308 291 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 291 IPR044651 GO:0004805|GO:0005992
Pvu9g0308 291 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 291 - -
Pvu9g0308 291 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 74 283 IPR006379 -
Pvu9g0308 291 CDD HAD_TPP 73 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0308 Pvu-Chr9 6576204 6578174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0308 68 283 Trehalose Biosynthesis Gene Families AT1G70290 27.313 2.76e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0308 K01087 - gmx:100788641 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0308 9 6576204 6578174 Pvu9g0308 9 6576204 6578174 ECH
Pvu8g1788 8 45202657 45205322 Pvu9g0308 9 6576204 6578174 PCT