Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0293 ATGAGTTCAACTCCCACTATGAGATTCAGCGGGCAGGAGAACTTTCATCCTGAGGATACTGGCCAAATAGAGAGGTCCCTTTGGGTGCTGGAACCTCCCAATCCACCACCTCTATGGAACAAGCTATTTAGTCCACTGAAGAAATCCATGTTCTTTTTTTCATCCAAGAAGAAAACTTACCTTGGACGTGCTGTTTCATTCTTAGAGAGTTTATTTCCTATCCTTTGCTGGTTCAAAAATTACAAGGCCTCTAAGTTTAAAAATGATTTGCTAGCCGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATATGCTAATTTGGCAAAACTTGATCCTCAGTATGGCTTGTACACCAGTGTTGTTCCTCCTCTAATCTATGCTGTGATGGGGAGTTCAAGAGAAATAGCTATTGGACCTGTAGCTGTAGTATCATTGCTTCTATCCTCCCTAGTCCCCAAAGTGGTAGATCCTGCTGTTGATCCTGATGCCTACAGAAATGTTGTTTTTACCGTGACCTTATTTGCTGGAATCTTTCAAGCTGCATTCGGTATTTTCAGGTTGGGGTTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTGGGATTCATGGCAGGCGCAGCCATCATTATTGGTCTTCAGCAGCTGAAGGGGTTGCTGGGGGTTACTCACTTTACCAACAAAACTGATGTAATATCCGTGTTGGTGTCTGTATATAAGTCACTCCATCAACAGATAACATCAGGAGAAAAATGGTACCCTCTGAATTTTGTCATCGGTTGTTCATTCCTCATATTCCTTTTAATTGCCCGATTTGTTGGCAGAAGAAACAAAAAACTTTTCTGGTTGCCTGCTATTGCTCCTCTTCTATCAGTTTTACTATCAACTTCAATTGTGTATTTGTCAAAAGCTGATAAGAGTGGGGTTAATATAATAAAGCATGTCAAAGGAGGTTTGAATCCAAGTTCAGTTCACAAGTTACAATTCCATGGTCCACATGTTGGACAAACAGCTAAAATTGGATTGATTTCTGCCGTTATTGCTCTCACAGAAGCAATAGCGGTTGGTCGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGCAACAAAGAAATGTTGGCAATGGGATGTATGAACATTGCGGGATCTCTCTCTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCAGTAAATTTCAGTGCAGGATGTCAAACATCAGTATCAAATATTGTGATGGCAGTTACTGTGTTTCTGTGTCTTGAATTGTTTACAAGGCTTCTATACTACACCCCTATGGCCATACTTGCTTCTATCATCCTCTCTGCACTTCCTGGGTTAATTGACATAAACGAAGCTTATTATATTTGGAAGGTTGACAAATTTGACTTTCTTGCCTGCATTGGTGCCTTCTTCGGTGTCTTGTTTGTATCAGTCGAAACTGGTCTTCTTGTTGCAGTGTCAATCTCATTTGCAAAGATACTTATACAATCAATTCGACCAGGGATAGAAGTTTTAGGCCAAGTTCCAAGAACAGAAGCATTCTGCGATGTTAGTCAATATCCTATGGCCACAAGCACTCCAGGCATTTTGGTGATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCTAATTTTGTTAGAGAAAGAATACTGAAGTGGGTCATCATGGAAGAAGAAAACGAACTTGCCAAGGGAAAGGTCTATGCAGTAATCTTAGACATGGGCAATCTCATGAATGTTGATACTTCTGGGATTCTAGTACTGGAGGAACTGCACAAGAGGTTGCTTTCGCGTGGCGTACGATTGGCCATGGTGAACCCGAGGTGGGTAGTAATTTGGAAGCTGAAAGTGGCACAGTTTGTGGATAAAATTGGAAAGAAATGGGTTTTTCTGACTGTTGGAGAAGCCGTAGATGCATGTCTATCTTCAAAACTCCCTGAGCCATGA 1965 0.4163 MSSTPTMRFSGQENFHPEDTGQIERSLWVLEPPNPPPLWNKLFSPLKKSMFFFSSKKKTYLGRAVSFLESLFPILCWFKNYKASKFKNDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDAYRNVVFTVTLFAGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGVTHFTNKTDVISVLVSVYKSLHQQITSGEKWYPLNFVIGCSFLIFLLIARFVGRRNKKLFWLPAIAPLLSVLLSTSIVYLSKADKSGVNIIKHVKGGLNPSSVHKLQFHGPHVGQTAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCQTSVSNIVMAVTVFLCLELFTRLLYYTPMAILASIILSALPGLIDINEAYYIWKVDKFDFLACIGAFFGVLFVSVETGLLVAVSISFAKILIQSIRPGIEVLGQVPRTEAFCDVSQYPMATSTPGILVIRISSGSLCFANANFVRERILKWVIMEEENELAKGKVYAVILDMGNLMNVDTSGILVLEELHKRLLSRGVRLAMVNPRWVVIWKLKVAQFVDKIGKKWVFLTVGEAVDACLSSKLPEP* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0293 654 Pfam Sulfate permease family 86 472 IPR011547 GO:0016021
Pvu9g0293 654 PANTHER SLC26A/SULP TRANSPORTER-RELATED 15 652 - -
Pvu9g0293 654 CDD STAS_SulP_like_sulfate_transporter 525 639 - -
Pvu9g0293 654 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Pvu9g0293 654 TIGRFAM sulP: sulfate permease 73 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu9g0293 654 Pfam STAS domain 525 642 IPR002645 -
Pvu9g0293 654 Gene3D STAS domain 504 649 IPR036513 -
Pvu9g0293 654 ProSiteProfiles STAS domain profile. 541 646 IPR002645 -
Pvu9g0293 654 PANTHER SULFATE TRANSPORTER 15 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu9g0293 654 SUPERFAMILY SpoIIaa-like 529 646 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0293 Pvu-Chr9 6301005 6305434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0293 7 651 Inorganic Solute Cotransporters AT5G10180 63.303 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0293 K17469 - gmx:100805269 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0293 9 6301005 6305434 Pvu9g0293 9 6301005 6305434 ECH
Pvu8g1770 8 44531505 44536064 Pvu9g0293 9 6301005 6305434 PCT