Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0265 ATGCTCTGCTTCCTGTGTACCTTGTTGTTGCCGGCGATGACCGGAGACCGATGTCAACCGTTGAAGGACATGGCGGAGGGAGGGGATGCCGCCGCCATGGGGAGGCCCTATGGGTCTGACTTTGTGACGGAAATTACTCCTGACTCTGCTGTACGTACAATTGATTACTTGTCCCAGGCTAGGAAAGCGCTCGCTGAGCGTTCCCCATTTGATGTTGCTGAAGAAACTTCGACTTCTGCTGTGCTTACTCTGCCCAGTGGGTTGGCTGGCCTGCTGAACCGACAGACTGATAACAGGAGACGTCCTAAGAAGTCCCATTCTGGTGGACATAAGAGAAAATCTTCTGCTAGGGCTAACCAGAAGAAGCCTGATGATTCTAACATTTGGATTGAGACTGAGGAGTACTTTAGGGACTTAACCTTGGCTGATATTGACACCTTGTTTGAGTTCTCTCGGGCAACTAGTTTAGCTTCTCAGGAATTGGGAAATGCTCCAAGTTACAATGCAGTTACTAGTTATATAAAGAATGAAATGGAACCTGTTCCAAGATTCAATGGAGGAGTCAGTAGTGAGGATGAAAAGAAGGGTGACTTAGTGGGTAGTGAGGATGCAAAGAAGGTTGATGAAGCTGTGGAAAATGAAGATGAATTGTTGGTAATTGGGGCAATTGACGAAGCTGCTGATGAACAAGCTTATCCTCAGGATGACAAGAATCAAGACATTTCTGATTCTGCTATTAGTTTAGAGTGGTTTTTAGGTTGTAGGAATAAACTTTCTTTGACTTCTGAGCGCCCCTCTAAGAAAAGGAGGCTTTTGGGTGTTGAAGCTGGTTTAGAGAAAGTTATAATGACTTGTCCTTGTGATGAGGGTCGACTGTTTTGCCATTATTGTGGAAGGGGAGACAGTGGCAGGGACTCCAATAGGTTAATTGTCTGCACTTCTTGTAAAATGGCAGTTCACTGTAAGTGCTATGGTGTGCTTGATGATGTAGATGAGACTTGGCTGTGCTCCTGGTGCAAGCAAATGGGTGATGTTGATGAATCAGTGAATCCTTGTGTTCTTTGTCCAAAGAAGGGTGGTGCATTAAAACCAGTTAATAGCAGTGTGGAAGGTGCTGGTTCTGCCCCATTTGTGCACTTATTTTGCTCTCTGTGGATGCCTGAGGTTTATGTAGATGATTTGATGAAGATGGAACCTGTTATGAATGTGGGGGAAATCAAGGAAACCCGGAAGAAATTAGTGTGTAGTGTTTGCAAAGCAAAATGTGGTGCATGTGTTCGGTGCAGCCATGGAAGCTGCAGAACTTCTTTCCACCCTTTATGTGCAAGGGAAGCTAGGCATAGGATGGAAGTTTGGGCAAAGTATGGTAATGATAATGTTGAGTTGCGGGCTTTTTGCTTGAAACACTCAGATCTACCCGAGAGTAGAAGCATCTTGCCACAGGAAGGCTTTATTGAGGTTAGAAATGAATTTTCTGAAGCCAATGACCTTCCAGTGACATTGCCAGTGAGTGGTGAACACAACTTGCGAGATTGCAGGAATGGAGGATTAGTCTCTGACAGTAATCCAGACAAATTGAACGATAATGGCGAACCACCAGATGGAGGATTACCTGATTGCACGTTAAGTGCTCACATGTTGGGATGTGGTGCTCTGCCCCAACAAAATGTAGAAGTGGTAGGGAGAGGGAATGAGAATGTTGATGCTTCTGATTCTCTCAGTTTTGCTCTAGTTTTGAAGAAGTTGATTGATCGAGGAAAGGTTAACGTAAAAGACGTAGCATTGGAGATTGGCATTTCACCAGATACATTAACTGCAAATACAAATGAAGCTTATATGGCCCCTGATGTCCGACACAAAATAGTGAATTGGCTAAAAGGCCATGTATATACCAGTGCATTTCAGAAGGGTTTAAAGGTCAAATTCAAACCAGCCAATGCATCCAAAATTGATAGTGGAGCCCCAGATGGCTCTGATATTTTACCAATATCAGACTCAGGTTTGCTGGATCCTGTTGCTGTTAAGTCAGTTCCACCAAGGAGGAGAACAACCAATAACATTAGAATTTTGAAGGATAATAAAGTGATATGTCCATCTGAGGGGGTTACAAGTGAGAATGGGATGCCAGTGCACATGTGCAGAGTAGGTCAGTCCAACTGTGAGAATCCAACAACTTCTAATGAAGCATCCATCCCCGATGCAACTGAAATGAACTTACCCAAGTCTGAGGATATTTTTCATGAAGTTCAAGGGAATGCTGATAAACCTAACAAATCCTGCTTATCTGGAAAGGGTGCAGTCTCTAGTTACATTCATCCATTCACCAACAAGAAATTGCTGCAGATTGGGGTGCCTTTGGAGGATGTTATATGTTCAAGTGACAAGAAAAATTCGGGTTTGGTTGAATCCTTCGGGGCTAGTGGCTGCTCAAATAGCCAAAATCAGAATTTAACTTGCAGTGAAATATCAAAGTCTGACGCAGTAAAGAAAGAGCAATTGGTTAGAAGTAAAGAAATGGAACTTTCGGAACTTTCTCCACAAGATGAATTGGAAGGGGAACTTGTTTATTTTCAGTATAGGTTATTGCAGAATGTGGTTGCAAAAAGGAGGCATATTGATAATTTAATCTACAGTGTTGCCAAGAGTTTACCTCATGAGATTGATAAGGCACATCAACAAAGATGGGATGATGTTATTGTTAATCAATATCTACGTGATCTTAGAGAGGCAAAAAAGCAAGGCAGAAAAGAAAGAAAGCACAAGGAAGCACAGGCAGTATTGGCTGCTGCAACTGCTGCTGCGGCAGCATCTTCTAGGTCATTCCGGAAAGACACCTTAGATGAATCTATGCAACAGGAGAATTTGTTAAAATCGGACAATTTAAACGGAAGGACTGGTGCTTGTTCTCAACCAATGCCTCGAGCCAAAGAGACACTCTCAAGAGTAGCTGTGACTAGAACTTCATCAGAGAAATATTCAGATTTTTGCATGCCAACCTCAGATTTTTCTAAGGAGCAATGTAAATCATGTGATATTTGTAGACGGTCAGAGACTATTTTAAACCCTATCCTAGTCTGCTCTGGTTGCAAGGTTTCAGTTCACTTGGATTGCTATCGTAGTGTGAAAGAAACAACAGGTCCGTGGTACTGTGAATTATGTGAAGAAATGTCATCTAGAAGCTCTGGGGCATCTGCTATCAACTTTTGGGAGAAACCTTATATTGGTGTAGAATGTGCTCTCTGTGGTGGTACTACTGGGGCTTTTAGGAAGTCTTCTGATGGTCAATGGATTCATGCTTTCTGTGCTGAGTGGGTTTTTGAGTCTACGTTCAGAAGAGGACAAATAGATGCTGTTGAAGGAATGGAAAGTGTGCCGAAAGGAGTTGACATTTGTTGTATCTGCCATTGCAAGAATGGTGTATGCATGAAGTGTTGCTATGGGCATTGTCAGACCACATTCCATCCATCCTGTGCTAGAAGTGCTGGTTTGTACATGAATGCGAGGACTGCAGGTGGCAAGGTTCAACACAAAGCTTACTGTGAAAAGCATAGTTTGGAGCAAAAAGCAAAGGCTGAAAATCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAGGCAAATTAGGGTTGAACTTGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAAATAAAGCGGGAATTAGTACTATGTTCACATGACATACTGGCCTTTAAAAGAGATAATGTTGCGAGGTCTGTGCTAGTTCATAGCCCTTTCATCCTTCCTGATGGTAGTTCAGAATCAGCTACAACGTCCCTGAAAGGGAACACAGATGGATATAGATCATGCAGTGAACCACTCCAAAGATCAGATGATGTTACTGTTGACAGTTCTGTTTCTGCTAAGCACCGTGTCAGAGTCGCCATATCTATGGATGCAGACCCAAAATTGGATGATGACTGCTCAACCTCCCAAAGCAAATATAACCACAAGATTCCAGAAAGAACACAATTTTCTGGCAAGAAGATTCCTCATAGAGCTGGTGCATCACGAAATATTTTGGATGAAGGTGGATGGAGATCCAAATCTAGAAAGCATGCTGAAACATTTGGAAAAGAGCTTGTTATGACGTCAGATGAAGCATCTATGAAGAATTCGATGCTACCAAAAGGATATGCATATGTTCCTGCTGATTGTCTGTCAAATGACAAGAACTCTAACGAGGATATATATGCTAGTGGGCCTGTGGAGCATGAAAGGTAG 4254 0.4252 MLCFLCTLLLPAMTGDRCQPLKDMAEGGDAAAMGRPYGSDFVTEITPDSAVRTIDYLSQARKALAERSPFDVAEETSTSAVLTLPSGLAGLLNRQTDNRRRPKKSHSGGHKRKSSARANQKKPDDSNIWIETEEYFRDLTLADIDTLFEFSRATSLASQELGNAPSYNAVTSYIKNEMEPVPRFNGGVSSEDEKKGDLVGSEDAKKVDEAVENEDELLVIGAIDEAADEQAYPQDDKNQDISDSAISLEWFLGCRNKLSLTSERPSKKRRLLGVEAGLEKVIMTCPCDEGRLFCHYCGRGDSGRDSNRLIVCTSCKMAVHCKCYGVLDDVDETWLCSWCKQMGDVDESVNPCVLCPKKGGALKPVNSSVEGAGSAPFVHLFCSLWMPEVYVDDLMKMEPVMNVGEIKETRKKLVCSVCKAKCGACVRCSHGSCRTSFHPLCAREARHRMEVWAKYGNDNVELRAFCLKHSDLPESRSILPQEGFIEVRNEFSEANDLPVTLPVSGEHNLRDCRNGGLVSDSNPDKLNDNGEPPDGGLPDCTLSAHMLGCGALPQQNVEVVGRGNENVDASDSLSFALVLKKLIDRGKVNVKDVALEIGISPDTLTANTNEAYMAPDVRHKIVNWLKGHVYTSAFQKGLKVKFKPANASKIDSGAPDGSDILPISDSGLLDPVAVKSVPPRRRTTNNIRILKDNKVICPSEGVTSENGMPVHMCRVGQSNCENPTTSNEASIPDATEMNLPKSEDIFHEVQGNADKPNKSCLSGKGAVSSYIHPFTNKKLLQIGVPLEDVICSSDKKNSGLVESFGASGCSNSQNQNLTCSEISKSDAVKKEQLVRSKEMELSELSPQDELEGELVYFQYRLLQNVVAKRRHIDNLIYSVAKSLPHEIDKAHQQRWDDVIVNQYLRDLREAKKQGRKERKHKEAQAVLAAATAAAAASSRSFRKDTLDESMQQENLLKSDNLNGRTGACSQPMPRAKETLSRVAVTRTSSEKYSDFCMPTSDFSKEQCKSCDICRRSETILNPILVCSGCKVSVHLDCYRSVKETTGPWYCELCEEMSSRSSGASAINFWEKPYIGVECALCGGTTGAFRKSSDGQWIHAFCAEWVFESTFRRGQIDAVEGMESVPKGVDICCICHCKNGVCMKCCYGHCQTTFHPSCARSAGLYMNARTAGGKVQHKAYCEKHSLEQKAKAENQKHGIEELKSIRQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDNVARSVLVHSPFILPDGSSESATTSLKGNTDGYRSCSEPLQRSDDVTVDSSVSAKHRVRVAISMDADPKLDDDCSTSQSKYNHKIPERTQFSGKKIPHRAGASRNILDEGGWRSKSRKHAETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKNSNEDIYASGPVEHER* 1418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0265 1417 SMART PHD_3 1009 1054 IPR001965 -
Pvu9g0265 1417 SMART PHD_3 293 340 IPR001965 -
Pvu9g0265 1417 SMART PHD_3 414 470 IPR001965 -
Pvu9g0265 1417 SMART PHD_3 1130 1184 IPR001965 -
Pvu9g0265 1417 SUPERFAMILY FYVE/PHD zinc finger 283 340 IPR011011 -
Pvu9g0265 1417 ProSiteProfiles Zinc finger PHD-type profile. 1007 1056 IPR019787 -
Pvu9g0265 1417 Pfam PHD-finger 307 340 - -
Pvu9g0265 1417 Pfam PHD-finger 1021 1054 - -
Pvu9g0265 1417 ProSiteProfiles Extended PHD (ePHD) domain profile. 349 470 IPR034732 -
Pvu9g0265 1417 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 113 486 - -
Pvu9g0265 1417 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 782 1406 - -
Pvu9g0265 1417 MobiDBLite consensus disorder prediction 99 117 - -
Pvu9g0265 1417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1074 1185 IPR013083 -
Pvu9g0265 1417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 346 472 IPR013083 -
Pvu9g0265 1417 MobiDBLite consensus disorder prediction 188 203 - -
Pvu9g0265 1417 MobiDBLite consensus disorder prediction 954 975 - -
Pvu9g0265 1417 PANTHER PHD FINGER PROTEINS 113 486 - -
Pvu9g0265 1417 PANTHER PHD FINGER PROTEINS 782 1406 - -
Pvu9g0265 1417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 998 1060 IPR013083 -
Pvu9g0265 1417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 344 IPR013083 -
Pvu9g0265 1417 MobiDBLite consensus disorder prediction 512 535 - -
Pvu9g0265 1417 Pfam PHD-zinc-finger like domain 351 469 - -
Pvu9g0265 1417 Pfam PHD-zinc-finger like domain 1076 1183 - -
Pvu9g0265 1417 MobiDBLite consensus disorder prediction 1398 1417 - -
Pvu9g0265 1417 MobiDBLite consensus disorder prediction 1262 1284 - -
Pvu9g0265 1417 ProSiteProfiles Zinc finger PHD-type profile. 291 342 IPR019787 -
Pvu9g0265 1417 ProSiteProfiles Extended PHD (ePHD) domain profile. 1075 1184 IPR034732 -
Pvu9g0265 1417 MobiDBLite consensus disorder prediction 184 203 - -
Pvu9g0265 1417 SUPERFAMILY FYVE/PHD zinc finger 1001 1055 IPR011011 -
Pvu9g0265 1417 Coils Coil 904 924 - -
Pvu9g0265 1417 MobiDBLite consensus disorder prediction 91 125 - -
Pvu9g0265 1417 CDD ePHD 1078 1183 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0265 288 476 C2H2 Transcription Factor Family AT3G14740 29.688 1.24e-16 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pvu9g0265 zf-HC5HC2H_2 2.4e-24 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0265 - - vun:114164309 2491.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0265 9 5942172 5955996 Pvu9g0265 9 5942172 5955996 ECH