Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0261 ATGGAGGGTGAGGATGATATAGGGCGTTGGGTGTTAGAGTTCCTTCTTCGGAACCCGCCGGCACTCGCAGGCAATAACCTAATTAAAAATGTGTTTCGGAGAATCTCCGTTTCTGACGCCAATTCCCTCATCAAGAAGACCATTCTCCTCAGATCTCTTCGTGACCACCTCTCCACTCTCTCCATCAATGATTCCCTTCTCAATACCCTCGAACACCTCGAGGAACTCCTTCGCCGCGACGCCTCTCCTGTCACCGCCACCATGACCGCTGCCTACTGCGCCGTTGCGGTCGATTGCACGCTCAAGTTCCTGCAAGTGAATCTCCACCATCACAACTCTGCTTACCTCCGCGCCGTCAACAGGATATGGCGAGCTAGGGTTCCGCGCATGAACGGCTCCGATTCCAGAGAGGGAAGCCTTCTGTTCTCGGCGGAGTTGGAGCGGTGGAGTAGCGACTTCGAAGCTTCCCTTTCGGATTCGCAAGTGAGGGAGAGGTTGGCCTCCATCGATGCCAGAAAGGATTCCATCATGAAGCTTGAGGCTTTTCTGGCGGAAGCCTGGGCCGATTTGGGCCCTTCTTTTCTTCAATTAGCGGCGTCATTGCACGCGAGCAGGGCCCCACAACACCAAGAGGGAGAAATTCAGATGTGTAGCAGTGCTGCTGCTGAGAATTTGCATTTAACAACAACTAATGAAGTTGAAAAGGTTGGGGATTGCATTTCTGGGGAGTTGCAAATGTTGGCTAAGGATTCTCTGCTTAATTCTTTTGAAGGGAATGAGGAGGCACCTACTGAAAAGCAGAGTGGAGAGGCAGATGTATCTTGCTCACATGACATTAATAATAATGAGGCTGATCCCATGGAAAAGGATCGAACTTCTATCCCTCAGAATTGTGACCGAAGGCCTAGTTTGATGGAAAAAAATATTACCGCTCGTGTTTACGAGTGGGATGATTCAATAGACGACGTGGACGGTGGAACATCAAACTATGCAAGTAGATTTAATTTGCCTACTCCAAAGAGGAGAACACTTTCTCCATTGAAGATGTATAAACCAGCACGCATTACAAAGAGGAGAAAAGTAAATAAATGGAGTCAGTTAGAAGAGGAGACGCTTAGGACTGCCGTAGAAAAGTTTGGCAGGGGAAATTGGAAGTTAATCCTAAATTCTCACAAAGATATATTTGAAGAGAGAACTGAAGTTGATTTGAAGGACAAGTGGAGAAATATGACGCGGTATGGGTGCAAATGA 1251 0.4788 MEGEDDIGRWVLEFLLRNPPALAGNNLIKNVFRRISVSDANSLIKKTILLRSLRDHLSTLSINDSLLNTLEHLEELLRRDASPVTATMTAAYCAVAVDCTLKFLQVNLHHHNSAYLRAVNRIWRARVPRMNGSDSREGSLLFSAELERWSSDFEASLSDSQVRERLASIDARKDSIMKLEAFLAEAWADLGPSFLQLAASLHASRAPQHQEGEIQMCSSAAAENLHLTTTNEVEKVGDCISGELQMLAKDSLLNSFEGNEEAPTEKQSGEADVSCSHDINNNEADPMEKDRTSIPQNCDRRPSLMEKNITARVYEWDDSIDDVDGGTSNYASRFNLPTPKRRTLSPLKMYKPARITKRRKVNKWSQLEEETLRTAVEKFGRGNWKLILNSHKDIFEERTEVDLKDKWRNMTRYGCK* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0261 416 MobiDBLite consensus disorder prediction 282 296 - -
Pvu9g0261 416 SUPERFAMILY Homeodomain-like 362 414 IPR009057 -
Pvu9g0261 416 CDD SANT_TRF 363 412 - -
Pvu9g0261 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 356 415 IPR017930 -
Pvu9g0261 416 ProSiteProfiles Myb-like domain profile. 356 411 IPR001005 -
Pvu9g0261 416 PANTHER MYB TRANSCRIPTION FACTOR 5 413 - -
Pvu9g0261 416 SMART sant 360 413 IPR001005 -
Pvu9g0261 416 MobiDBLite consensus disorder prediction 258 300 - -
Pvu9g0261 416 Pfam Myb-like DNA-binding domain 362 410 IPR001005 -
Pvu9g0261 416 PANTHER MYB TRANSCRIPTION FACTOR 5 413 - -
Pvu9g0261 416 Gene3D - 353 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0261 Pvu-Chr9 5887940 5890272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0261 7 410 Single Myb Histone (SMH) Gene Family AT1G15720 28.741 1.18e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu9g0261 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0261 - K11111 ccaj:109817184 489.574