Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0249 ATGGCTTCCAATTCCAATTCCAATTCCAATTCTAATTCCAATTCCAATTCCAATTCTAATTCCAATTCCGATTCCCCATCTCCACCCGATTCATCTTCCTCCCAATCTCCACCACCGTCGCAGGGCAATTCATCTCCACCACCATCGCAGGGCAATTCATCTCCTCCACCACCGTCACAGAACAATTCACCGCCTCCTCCCTCGTCAAACGATGAGAAATCTCCGCCTCCGCCGCCGCCGCCGCCACCACCACCTCCTGATAACGAATCAAGTGGCAACCGGTCACCGCCGCCCCCACGTTCGGGGCAGGAGTTTTCTCCTCCTCCACCTTCAAAGAACCGGTCGTCTCTTCCCAAGTCAACGTCTTCGAGCTCATCAGAAGATAGTGGACGCCATTCATTGAGCACACCAATTATAATAGTAATTGCAGCTGCAGCTGGGCTTTTTCTCCTTCTTCTTCTCATAGCCATCGTTGCGTGTTCAAAAAGAAAGAAGAGATCTCAGTCTTCCATTAATTACTACGGCAATAAACCTGATGATGGGTTTTACAAAAATGAGTATGGGTACAAGAACAATAACGTTGAGCACGTTATGAATATTCCTCCACATCCACATCAACATCCAGGAGCAGCTTGGTCAACACCACAACATGTTAGTACTGTATCGAGCAGTTCCAGTTTCTCTGGGCCACATGGTCCCATTTTGCCACCTCCACACCCCACAGTGGCCCTCGGATTCAACCAAAGCTCCTTCACTTACGCGGAGCTCTCGGCTGCCACTAATGGCTTTAGCCAACACAACCTGCTGGGTCAGGGTGGCTTCGGATACGTCCACAAAGGTGTTCTACCCAATGGCAAGGAAATTGCAGTGAAGAGCCTGAAATCCACTGGGTGCCAAGGGGACAGAGAATTCCAGGCTGAGGTTGAAATCATCAGCCGTGTCCATCATCGCCATCTGGTCTCACTTGTTGGTTATTGCATGTCAGAAACCCAAAAGCTCCTCGTTTATGAGTTTGTGCCTAACAATACCTTCGAATACCACCTTCATGGAAAGGATCGACCTGTGATGGATTGGGCTACCAGGCTCAAAATTGCGATTGGATCGGCCAGAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATTATTCACCGAGACATAAAGGGTCCAAACATTCTTCTTGAAAACAACTTTGAAGCCAAAGTGGCAGATTTTGGGTTGGCAAAGTTTAATCAAGACGCTAACACTCACGTTTCTACTCGTGTAATGGGAACATTTGGGTATTTGGCTCCAGAGTATGCATCAACCGGTAAGCTAACTGACAAATCTGATGTGTTCTCGTTCGGTGTTATGCTTTTGGAGCTCATAACAGGTCGACCCCCTGTGGACAACACTGGGGAAATGGAAGATAGTTTGGCCGACTGGGCTAGACCACTTTGTACAAAGGCAATGGAGGATGGAAGTTTTGAAGGGCTTGTGGATCCACGTTTAAAGGGGAATTATGACAAGCAGCAAATGGCTTGTATGGTGGCTTGTGCTGCATTTAGCATAAGGCACTCAGCAAAGAGGCGTCCAAAAATGAGTCAGGTTGTGAGAGTACTGGAAGGTGATGTGTCAGTAGACGTGCTTAGTCAGGAGGGAGTGAAACCTGGACAAAGTAGAATGTTCAACTCAAGTGGGGAGTATGGTGCGAAGACATACGGTGCTGACATGGTGAAGTTCAGGAAACTAGATAGTAGCAGTGAGTTTGGTGCAACCAGTGAATACGGCCTTAAACCTCCCATCCCAAGAAGTGACCAATCATCTTCTGAATATGCCAATGCCAGGAGGGTAGGAGCTCGAATGCACAATCCTTAA 1860 0.4785 MASNSNSNSNSNSNSNSNSNSNSDSPSPPDSSSSQSPPPSQGNSSPPPSQGNSSPPPPSQNNSPPPPSSNDEKSPPPPPPPPPPPPDNESSGNRSPPPPRSGQEFSPPPPSKNRSSLPKSTSSSSSEDSGRHSLSTPIIIVIAAAAGLFLLLLLIAIVACSKRKKRSQSSINYYGNKPDDGFYKNEYGYKNNNVEHVMNIPPHPHQHPGAAWSTPQHVSTVSSSSSFSGPHGPILPPPHPTVALGFNQSSFTYAELSAATNGFSQHNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGCQGDREFQAEVEIISRVHHRHLVSLVGYCMSETQKLLVYEFVPNNTFEYHLHGKDRPVMDWATRLKIAIGSARGLAYLHEDCHPRIIHRDIKGPNILLENNFEAKVADFGLAKFNQDANTHVSTRVMGTFGYLAPEYASTGKLTDKSDVFSFGVMLLELITGRPPVDNTGEMEDSLADWARPLCTKAMEDGSFEGLVDPRLKGNYDKQQMACMVACAAFSIRHSAKRRPKMSQVVRVLEGDVSVDVLSQEGVKPGQSRMFNSSGEYGAKTYGADMVKFRKLDSSSEFGATSEYGLKPPIPRSDQSSSEYANARRVGARMHNP* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0249 619 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 7 586 - -
Pvu9g0249 619 MobiDBLite consensus disorder prediction 115 132 - -
Pvu9g0249 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Pvu9g0249 619 SUPERFAMILY Formin homology 2 domain (FH2 domain) 76 219 - -
Pvu9g0249 619 MobiDBLite consensus disorder prediction 1 30 - -
Pvu9g0249 619 Gene3D Phosphorylase Kinase; domain 1 240 338 - -
Pvu9g0249 619 MobiDBLite consensus disorder prediction 100 114 - -
Pvu9g0249 619 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 586 - -
Pvu9g0249 619 Pfam Protein tyrosine and serine/threonine kinase 266 467 IPR001245 GO:0004672|GO:0006468
Pvu9g0249 619 Gene3D Transferase(Phosphotransferase) domain 1 339 547 - -
Pvu9g0249 619 MobiDBLite consensus disorder prediction 584 619 - -
Pvu9g0249 619 SUPERFAMILY Protein kinase-like (PK-like) 243 535 IPR011009 -
Pvu9g0249 619 ProSiteProfiles Protein kinase domain profile. 263 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0249 619 MobiDBLite consensus disorder prediction 31 93 - -
Pvu9g0249 619 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Pvu9g0249 619 MobiDBLite consensus disorder prediction 1 132 - -
Pvu9g0249 619 SMART serkin_6 263 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0249 Pvu-Chr9 5642680 5646613 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0249 144 606 Trihelix Transcription Factor Family AT1G70460 51.059 1.56e-148 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pvu9g0249 PK_Tyr_Ser-Thr 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0249 - - gmx:100806299 773.852