LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g0246	ATGGCGGCATCCGCCACTGTCTCCGGCGGTGCGATGCCGGATCTAACTCATCGAACCTCCTTTCTCGGCCTCAAACTCTACACCCTGCTCCTCATTTTAGTTCTAATGGTGGTGACAACGGTGCTCCTGATCCTCCTCTGCGTCCGCCGGAGCTCCAAGAAGAGGAAAATGCGAGTGAAGCACAGCTCCGGCGCGATCCCGCTGGTGTCGAAGGAGATCGTGGAGGTGAATACTCTGGAGCTGAAAATCGAAGAGGTGGAGGAGGAAGATCCGAAGAAGAAGGAGACGAAGCTTGAAGAGAGTCCGTCGGTGGAGTCACCGAACATTGGGTGGGGACGCTGGTATAGCCTCAGAGAGCTTGAGACTGCGACGCAAGGGTTCGCCGAAGGGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTATAGAGGAAATTTGCTCGACGGTTCTGTCGTCGCCGTCAAAAATCTTCTCAACAACAAGGGGCAGGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAGGCATAAGAATTTGGTGGGGCTAGTTGGATATTGTGCAGAAGGTGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAACATTGGAACAGTGGCTGCATGGTGAAGTAGGACCTGTTAGCCCCCTGACATGGGATATACGAATGACGATTGCTGTTGGGACTGCGAAAGGGCTAGCGTACTTGCACGAAGGATTAGAACCCAAAGTTGTCCATCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAAGTGGAATGCTAAAGTATCAGACTTTGGACTAGCCAAGCTCTTAGGGCCTGAGAAAAGCTATGTGACAACACGTGTAATGGGGACATTTGGATATGTGTCACCTGAGTATGCAAGCACGGGTATGCTTAATGAGGGCAGCGATGTGTATAGTTTTGGGATTCTACTTATGGAGCTAATTACGGGAAGGAGTCCAATCGATTATTCTAGACCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAAGGAATGGTTGCAAATCGTCGTGGTGATGAACTAGTTGATCCTTTAATAGATATTCAACCCTCTCAAAGATCTTTGAAACGAGCTTTACTTGTATGTCTGCGCTGTATAGATTTGGATGTTAGTAAGCGACCAAAGATGGGCCAAATTGTTCACATGCTTGAGGCTGATGATTTTCCCTTTCGTTCTGAACATCGAACAAATAGAGAGAAAGATCCTGTTCATTCTAAAGCAGCTGCTCCCAGCAAGATTCCATATCCAACAAGGCATGTAGAGCCCATAGATAAATCAAGCTGGAGATGA	1335	0.4727	MAASATVSGGAMPDLTHRTSFLGLKLYTLLLILVLMVVTTVLLILLCVRRSSKKRKMRVKHSSGAIPLVSKEIVEVNTLELKIEEVEEEDPKKKETKLEESPSVESPNIGWGRWYSLRELETATQGFAEGNVIGEGGYGIVYRGNLLDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGAQRMLVYEYVDNGTLEQWLHGEVGPVSPLTWDIRMTIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGPEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVANRRGDELVDPLIDIQPSQRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSEHRTNREKDPVHSKAAAPSKIPYPTRHVEPIDKSSWR*	445

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g0246	444	Coils	Coil	69	89	-	-
	Pvu9g0246	444	SUPERFAMILY	Protein kinase-like (PK-like)	105	399	IPR011009	-
	Pvu9g0246	444	Gene3D	Transferase(Phosphotransferase) domain 1	203	415	-	-
	Pvu9g0246	444	ProSitePatterns	Protein kinases ATP-binding region signature.	133	155	IPR017441	GO:0005524
	Pvu9g0246	444	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	249	261	IPR008271	GO:0004672\|GO:0006468
	Pvu9g0246	444	MobiDBLite	consensus disorder prediction	86	101	-	-
	Pvu9g0246	444	MobiDBLite	consensus disorder prediction	406	444	-	-
	Pvu9g0246	444	MobiDBLite	consensus disorder prediction	86	106	-	-
	Pvu9g0246	444	MobiDBLite	consensus disorder prediction	406	421	-	-
	Pvu9g0246	444	Gene3D	Phosphorylase Kinase; domain 1	85	202	-	-
	Pvu9g0246	444	CDD	STKc_IRAK	133	399	-	-
	Pvu9g0246	444	ProSiteProfiles	Protein kinase domain profile.	127	391	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu9g0246	444	Pfam	Protein kinase domain	129	396	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu9g0246	444	SMART	serkin_6	127	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu9g0246	444	PANTHER	OS03G0227900 PROTEIN	100	415	-	-
	Pvu9g0246	444	PANTHER	OS03G0227900 PROTEIN	15	95	-	-
	Pvu9g0246	444	PANTHER	OS01G0323000 PROTEIN	15	95	-	-
	Pvu9g0246	444	PANTHER	OS01G0323000 PROTEIN	100	415	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g0246	Pvu-Chr9	5537356	5540969	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu9g0246	107	399	Receptor kinase-like Gene Family	AT4G02010	47.987	2.74e-92	292

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Pvu9g0246		Pkinase	7e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g0246	-		-	vra:106762137	747.273