Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0245 ATGGGGATAGTGTGGTTTGGGTTGTTGTTGTTGCTGGTGGTGAGTCAGGTGACATTGGAGCAGATTGAGCCACTGAGTTCCTCTGAGGAGCGAGAATCGTTACTTGAACTGAGGGCTTCTCTGGGGTTGAGGAGCAAGGAATGGCCAAGAAAACCAGACCCTTGTTTACTCTGGGTTGGCATCACATGCCAGAATGGTCGAGTCGTTGGGATCAATATCTCTGGGTTTAAAAGAACCCGAATTGGTAGGAGGAACCCGCAATTTTCAGCGGATGCTTTGGCCAATTTCACTCTCTTGCAGTCCTTCAATGCCTCCAATTTCCTCCTTCCTGGCCCTATTCCTGATTGGTTTGGTCTCTCCCTTCCTTCTCTCAGAGTGCTTGATCTTCGTTCTTGCTCCATTGTTAATGCTATTCCCTTCACTCTTGGCAATTTGACCAACCTCACTAGTCTCTATCTCTCTGACAACAACCTCAATGGGAATGTTCCCGAGTCTTTGGGTCAACTCTCTGTCCTTTCGGTTCTTGATCTTTCCAGGAATTCTCTTACTGGCTCCATACCAACGTCTTTTGCCTTTCTTGGGAATCTTTCCTCCCTTGACATGTCTGCCAATTTTTTGTTTGGGCCGATTCCCCCTGGCATAGGGTCTCTTTCCAGGTTACAGTACTTGAATCTTTCCAACAATGGACTTGCATCTTTGCCTGCTCAATTGGGGGGTCTAACCAGCTTAATTGTCCTTGATCTTAGTCAGAATTCTTTTGCCAGTGGCGGACTGCCTCTGGATTTGGTTGGGCTGAGGAACTTGCAGCAGATGATACTCTCAAACAGCATGCTCACCGGAGTTCTGCCGGGGAGTTTGTTTACTGGTTCATTGCAGTTGCAGTTCCTAGTACTGAGGCAGAATAATTTTAGTGGTTCATTGCCTGTTGAGTTGTTATCTCTGCCAAGATTGAGCTTCCTTGATGTGTCTGCAAATAATTTCAGCGGTCTGCTTCCTAATTCGAGTTTGGCTGCTAATGCTACTGTTGCGGTGCTCAATATTTCGCACAATAAGTTTTATGGAGGCCTCACTACTGCTCTAAGAAGGTTTGAGTTTGTTGATCTTTCAAACAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCATAATGCGTCTCTAGATAGCAACTGTCTCCAGAACTCCACAAATCAGAGGTCAACGGTGGAATGTACATCATTTTATGCAGAGAGGGGGCTAAATTTTGATAATTTTGGACACCCGAATACAACAAAACCTCCTGCCTCCGAAAGCTCTGGAAAGAGCAATAAAACTAAGATTATACTGGCAGCAGTCTTGGGTGGATTGGGTTTAATTGCACTTTTGGTGTTGCTAGTGGTTCTGTTGCTTCTGTGTGCTCGTAAGAGGGGTAATTCAAATCAGAGAGGAAACGGTGTCGGTCCTGCTCCTGTTGGCAGCAGTCCTCCAAACCCTGGTGTACCAATCCAATTTCCAAATGTAGGTGACTCATTTACATATCATCAGTTGCTCCAGGCAACTGGAGATTTCAATGATGTAAATCTTATCAAACATGGCCACACTGGGGACTTCTTCAATGGTGTTTTGGAGAGTGGGATTCCTGTCATCATCAAAAGAATCGACATGCGTTCAGCTAGAAAAGAGGCTTACCTCTCGGAGTTGGACTTCTTCAATAAGGTTTCTCATCAGAGATTTGTTCCATTCTTAGGTCATTGTTTAGAAAATGAGAATGAGAAGTTTCTGGTTTATAAAAATATGCCAAATGGGGACTTGTCTAATTGCTTGTACTACAAAAAGACTACATCTGAAGATGGTACTTTGCAATCACTGGACTGGATAACCAGGTTAAAAATTGCTACTGGAGCCGCAGAGGCCCTGTCGTATCTACATCATGAATGTATGCCACCCATTGTTCACAGGGATATTCAAGCAAGCAGTATACTTCTTGACGACAAATACGAAGTTCGGTTGGGTAGTCTAAGTGAAGCCTGTGCTCAAGAAGGTGAAATTCATCAAAGTAAGATCACCAGGTTTCTGCGGTTGCCTCAGTCCTCTGACCAAGGCCCATCTGGTTTTTCAACAACAATTTGTGCGTATGACGTTTATTGCTTTGGAAAAGTTTTACTTGAACTGGTGACTGGTAGGGTGGGAATGAGTGCAGCCAGCGATGCGGAAGTAAAGGAATGGTTTGATCTGATTCTACCTTGTATTAATATGTATGAGAAGGAGCTTGTGACGAAGATTGTGGATCCATCGATGGTTGTTGACGATGATTTCCTAGAGGAAGTATGGGCTATAGCCATTGTTGCCAGGTCTTGTTTAAATCCCAAACCTTCAAGGAGACCCCCAATGAGATATATTCTGAAGGCTTTGGAAAACCCTTTGAAGGTGGTGAGGGAAGAAAACTCCAGTTCTGCGCGGCTAAGAGCAACCTCTTCTAGAGGTTCTTGGAATGCTGCTACTTTGTTTGGGAGTTGGCGTCAGAGTTCTTCTGATGTAACAACAACAACTCCAGCAGCCTCTGGTATAAAACTAGATAGAGGTGGTAGTTTAAAACTGTCAGGAACTACTGGGTCGCAGTCACAGGGTAGTTTCCACAATGGCGGCGGTGAGATTTCGTTGTCACGGAGACGACACTCGAAGGAGATATTCCCAGAGCCATCAGGCATTCATGATGTAGAGAGGTTGGAGCTGGAATAG 2715 0.4471 MGIVWFGLLLLLVVSQVTLEQIEPLSSSEERESLLELRASLGLRSKEWPRKPDPCLLWVGITCQNGRVVGINISGFKRTRIGRRNPQFSADALANFTLLQSFNASNFLLPGPIPDWFGLSLPSLRVLDLRSCSIVNAIPFTLGNLTNLTSLYLSDNNLNGNVPESLGQLSVLSVLDLSRNSLTGSIPTSFAFLGNLSSLDMSANFLFGPIPPGIGSLSRLQYLNLSNNGLASLPAQLGGLTSLIVLDLSQNSFASGGLPLDLVGLRNLQQMILSNSMLTGVLPGSLFTGSLQLQFLVLRQNNFSGSLPVELLSLPRLSFLDVSANNFSGLLPNSSLAANATVAVLNISHNKFYGGLTTALRRFEFVDLSNNYFEGKVLDFMHNASLDSNCLQNSTNQRSTVECTSFYAERGLNFDNFGHPNTTKPPASESSGKSNKTKIILAAVLGGLGLIALLVLLVVLLLLCARKRGNSNQRGNGVGPAPVGSSPPNPGVPIQFPNVGDSFTYHQLLQATGDFNDVNLIKHGHTGDFFNGVLESGIPVIIKRIDMRSARKEAYLSELDFFNKVSHQRFVPFLGHCLENENEKFLVYKNMPNGDLSNCLYYKKTTSEDGTLQSLDWITRLKIATGAAEALSYLHHECMPPIVHRDIQASSILLDDKYEVRLGSLSEACAQEGEIHQSKITRFLRLPQSSDQGPSGFSTTICAYDVYCFGKVLLELVTGRVGMSAASDAEVKEWFDLILPCINMYEKELVTKIVDPSMVVDDDFLEEVWAIAIVARSCLNPKPSRRPPMRYILKALENPLKVVREENSSSARLRATSSRGSWNAATLFGSWRQSSSDVTTTTPAASGIKLDRGGSLKLSGTTGSQSQGSFHNGGGEISLSRRRHSKEIFPEPSGIHDVERLELE* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0245 904 PRINTS Leucine-rich repeat signature 172 185 - -
Pvu9g0245 904 PRINTS Leucine-rich repeat signature 217 230 - -
Pvu9g0245 904 Pfam Leucine Rich repeats (2 copies) 219 253 IPR025875 -
Pvu9g0245 904 SUPERFAMILY L domain-like 91 405 - -
Pvu9g0245 904 MobiDBLite consensus disorder prediction 877 904 - -
Pvu9g0245 904 ProSiteProfiles Protein kinase domain profile. 515 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0245 904 MobiDBLite consensus disorder prediction 472 491 - -
Pvu9g0245 904 SUPERFAMILY Protein kinase-like (PK-like) 488 796 IPR011009 -
Pvu9g0245 904 Gene3D Phosphorylase Kinase; domain 1 494 589 - -
Pvu9g0245 904 PANTHER BNAA07G03560D PROTEIN 8 184 - -
Pvu9g0245 904 PANTHER BNAA07G03560D PROTEIN 182 845 - -
Pvu9g0245 904 MobiDBLite consensus disorder prediction 835 904 - -
Pvu9g0245 904 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Pvu9g0245 904 SMART LRR_typ_2 169 192 IPR003591 -
Pvu9g0245 904 SMART LRR_typ_2 121 144 IPR003591 -
Pvu9g0245 904 SMART LRR_typ_2 145 168 IPR003591 -
Pvu9g0245 904 SMART LRR_typ_2 265 289 IPR003591 -
Pvu9g0245 904 SMART LRR_typ_2 217 240 IPR003591 -
Pvu9g0245 904 SMART LRR_typ_2 314 337 IPR003591 -
Pvu9g0245 904 Pfam Protein tyrosine and serine/threonine kinase 521 795 IPR001245 GO:0004672|GO:0006468
Pvu9g0245 904 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Pvu9g0245 904 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Pvu9g0245 904 MobiDBLite consensus disorder prediction 857 874 - -
Pvu9g0245 904 PANTHER RECEPTOR-LIKE PROTEIN 55 182 845 - -
Pvu9g0245 904 PANTHER RECEPTOR-LIKE PROTEIN 55 8 184 - -
Pvu9g0245 904 Gene3D Transferase(Phosphotransferase) domain 1 591 818 - -
Pvu9g0245 904 Gene3D Ribonuclease Inhibitor 190 416 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0245 Pvu-Chr9 5516384 5522353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0245 30 688 Miscellaneous Gene Families AT2G16250 56.907 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pvu9g0245 PK_Tyr_Ser-Thr 8.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0245 - - gmx:100805769 1479.54