Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0209 ATGCCTCAAAAACACAACACCGTTGTCTACCTCCATGGGACCCTCGATCTGGTAATCGTCGAGGCTCGCTTTCTTCCCAACATGGACTTGCTCTCCGAGCGCGTTCGAAGGTTCTTCTCCGCCCTCAACACTTGCAGTGCCTCCATCACCGGAAAACGGAAGCTCCACCGCGCCCGCCACCGCCACCGCAAGATCATCACCAGCGATCCCTACGTCACCGTCTGCCTTGCCGGCGCCACCGTCGCGCGCACCCGCGTGATCTCTAATTCGCAGAACCCTACCTGGGACGAGCACTTCAAGATCCCGCTCGCGCACCCGGCCGCGCAGGTCGACTTCTTCGTCAAGGACAACGACATGTTCGGAGCCGACCTCATTGGAGTCGTCACCGTCTCCGCCGAGAGGATCCTCTCCTGCGAGCCCATCAGCGACTGGTTCCCGATCATCGGCTCGTTCGGGAAGCCGCCAAAGCCTGACTGCGCGCTGCGCCTCGCCATGAAATTCACGAGGTGCGAGGACAATCGCATGTTCCGGTCCATCGACGAACCGGATCCGGACCGGTTCGTGGTTCGTGACTCGTATTTCCCAGTCCGACACGGAGGGGCTGTGACGCTGTATCAGGACGCGCACGTGCCTGAGGGGATGTTGCCGGAGGTTGAGTTAGACGAGGGTGTGGTGTTTGAGCATGGGAAGTGCTGGGAAGATATATGCCACGCCATTTTGGAAGCGCACCATTTGGTTTACATTGTGGGTTGGTCCATCTACCATAAGGTTAGGCTCGTGAGAGAGCCTACCAAACCTTTACCTAGCGGTGGTAGTTTAAATTTGGGGGAGTTGCTCAAGTACAAGTCTCAAGAAGGTTTGCGAGTTTTACTATTGGTTTGGGATGATAAGACTTCGCACAGCAAGTTTTTCATTAACACGACTGGAGTAATGCAAACGCATGATGAAGAAACTCGAAAGTTTTTCAAGCATTCTTCAGTTAGATGTTTGCTTTCACCAAGATATGCCAGCAGTAAGCTTAGCATTTTCAGGCAGCAGGTTGTTGGAACGCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGCACACGGGAATAATAGGAAGATAACTGCATTTATAGGTGGTCTAGATCTTTGTGATGGCCGGTATGATACACCTGAGCACAGAATTTTTCGCGATGTTGACACTGTTTATCAGGACGATTTTCATAATCCCACATTTTGCACGGGAACCAAGGGTCCAAGGCAACCATGGCATGATTTACATTGCAAAATTGAAGGCCCTGCTGCATACGATATACTCACTAATTTTGAGCAGCGTTGGAAAAAGGCCACCAGATGGTCTGAGTTGGGTCGAAAACTCAAAAGAGTATCTCACTGGCACGATGATTCTTTGATCAAGTTAGAACGCATCTCTTGGATTCTTAGTCCTTCTGAATCAATTCAAACCGATGATCCTGAACTATGGGTTTCAAAGGAAGACGATCCTAAAAATTGGCATGTTCAGGTTTTTCGATCCATAGATTCTGGCTCTTTGAAAGGATTTCCTAAGGATGTATTTGAAGCTGAGTCCCAGAACCTTGTTTGTGCAAAAAATTTGGTTGTAGACAAGAGTATTCAAACAGCATATATACATGCTATCAGATCTGCTCAACATTTTATTTATATCGAGAATCAATATTTTGTCGGATCTTCCTTTGCTTGGCCAGCTTACAAAGATGCAGGCGCTGATAACCTAATTCCGATGGAGTTGGCACTGAAGATAGTCAGTAAGATACGATCCAAGGAGAGATTTACAGTTTATATTGTCATCCCAATGTGGCCCGAAGGTACCCCTTCATCTGCTACTGTGCAAGAGATACTCTTTTGGCAGGGACAAACTATGCAAATGATGTATGATGTCATAGCTCGGGAAATAAAAGCTATGCAACTTGACAGTCATCCACTAGATTATCTCAACTTTTATTGTCTTGGAAACCGAGAGCCGTTCAAAACTGATTTTTTAAGCTCAAGTAATTTGCCTCCAGATAATGGCGAAACGATTTCAGCCTCACAAAAGTTCCGAAGGTTCATGATTTATGTACATGCCAAGGGAATGGTTGTGGATGATGAATATGTAATTCTTGGGTCTGCCAACATCAATCAACGATCCATGGCTGGATCAAGAGACACTGAGATAGCCATGGGTGCATATCAACCCCGTCATACATGGAGTGCGAAAAAGGGGCATCCACATGGTCAGGTTTATGGGTATAGGATGTCTTTATGGGCAGAACACACGGGGAGCATAGAAGGTTGCTTTAAGGATCCTGAAAGTCTGGAGTGCGTGAAAAGTGTGAACAATATTGCTGAAGAAAACTGGAGAAAGTACATAGCTGATGATTATACTCCATTGAAAGGGCACCTGATAAAATATCCTGTGAATATAAATATCAATGGGAAGGTAAAGTCCATACCCGGATTTGAGTCTTTCCCAGATGTTGGGGGCAAGGTGCTTGGCTCCAGGTCTAACCTTCCTGATGCTCTAACCACATAG 2544 0.4701 MPQKHNTVVYLHGTLDLVIVEARFLPNMDLLSERVRRFFSALNTCSASITGKRKLHRARHRHRKIITSDPYVTVCLAGATVARTRVISNSQNPTWDEHFKIPLAHPAAQVDFFVKDNDMFGADLIGVVTVSAERILSCEPISDWFPIIGSFGKPPKPDCALRLAMKFTRCEDNRMFRSIDEPDPDRFVVRDSYFPVRHGGAVTLYQDAHVPEGMLPEVELDEGVVFEHGKCWEDICHAILEAHHLVYIVGWSIYHKVRLVREPTKPLPSGGSLNLGELLKYKSQEGLRVLLLVWDDKTSHSKFFINTTGVMQTHDEETRKFFKHSSVRCLLSPRYASSKLSIFRQQVVGTLFTHHQKCVIVDTQAHGNNRKITAFIGGLDLCDGRYDTPEHRIFRDVDTVYQDDFHNPTFCTGTKGPRQPWHDLHCKIEGPAAYDILTNFEQRWKKATRWSELGRKLKRVSHWHDDSLIKLERISWILSPSESIQTDDPELWVSKEDDPKNWHVQVFRSIDSGSLKGFPKDVFEAESQNLVCAKNLVVDKSIQTAYIHAIRSAQHFIYIENQYFVGSSFAWPAYKDAGADNLIPMELALKIVSKIRSKERFTVYIVIPMWPEGTPSSATVQEILFWQGQTMQMMYDVIAREIKAMQLDSHPLDYLNFYCLGNREPFKTDFLSSSNLPPDNGETISASQKFRRFMIYVHAKGMVVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPRHTWSAKKGHPHGQVYGYRMSLWAEHTGSIEGCFKDPESLECVKSVNNIAEENWRKYIADDYTPLKGHLIKYPVNININGKVKSIPGFESFPDVGGKVLGSRSNLPDALTT* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0209 847 Gene3D C2 domain 11 178 IPR035892 -
Pvu9g0209 847 CDD C2_plant_PLD 8 168 - -
Pvu9g0209 847 SUPERFAMILY Phospholipase D/nuclease 176 458 - -
Pvu9g0209 847 Pfam Phospholipase D Active site motif 694 720 IPR001736 GO:0003824
Pvu9g0209 847 Pfam Phospholipase D Active site motif 351 385 IPR001736 GO:0003824
Pvu9g0209 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 350 385 IPR001736 GO:0003824
Pvu9g0209 847 Pfam Phospholipase D C terminal 768 837 IPR024632 -
Pvu9g0209 847 SUPERFAMILY Phospholipase D/nuclease 542 779 - -
Pvu9g0209 847 Gene3D Endonuclease Chain A 517 743 - -
Pvu9g0209 847 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Pvu9g0209 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 693 720 IPR001736 GO:0003824
Pvu9g0209 847 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 164 IPR035892 -
Pvu9g0209 847 Gene3D Endonuclease Chain A 225 468 - -
Pvu9g0209 847 SMART C2_3c 14 144 IPR000008 -
Pvu9g0209 847 PANTHER PHOSPHOLIPASE D 6 846 IPR015679 -
Pvu9g0209 847 SMART pld_4 693 720 IPR001736 GO:0003824
Pvu9g0209 847 SMART pld_4 350 385 IPR001736 GO:0003824
Pvu9g0209 847 PIRSF PLD_plant 1 847 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pvu9g0209 847 Pfam C2 domain 13 147 IPR000008 -
Pvu9g0209 847 PANTHER PHOSPHOLIPASE D 6 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0209 Pvu-Chr9 3841367 3847956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0209 8 684 Phospholipase D Gene Family (Wang group) AT4G35790 66.378 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0209 K01115 - gmx:100795859 1580.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0209 9 3841367 3847956 Pvu9g0209 9 3841367 3847956 ECH