Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0192 ATGGCCTCATCGCCATGTGACTGTTGGACCCATCTTTCTCAGTCACTTTCTTCTTCTTCTTCTTCTCCTTCCTCTTCCTCACTCCCCCAAACCCTTCTTCCTCCTCCTCCTTCTTCTTCCTCTGAACATGTCTGGAACGACATCAAACTCCCCTCTCTCTCCAACTCCCCCGTTGACTTCAACCCTTCTTCTTCTCATTCTTCTCTCCTCTCTCTCTCTTCCTCTCACAACCACCACTCTCTTCTCTCTGTCTCCAACGCTTCTTTCCCCTCCAACCAAACCACACACCACCAAGATCAGCGCCATGTGCGCATCATGAAAAATCGAGAATCCGCCGTTCGCTCCAGAGCCAGAAAACAGGCTTATAGAAGAGGGTTGGAAGCTGAAATTGCTCGTTTGACGGAGGAGAATTCGAGACTAAGAAAACAATTGAAAGAGTTGCAATGCTCTTTATCTTCATCAGAGAATACCCCTGACAGAATCAGTGCTCCCTGCAGAACCTCATCATCTCCATTTTGA 519 0.4798 MASSPCDCWTHLSQSLSSSSSSPSSSSLPQTLLPPPPSSSSEHVWNDIKLPSLSNSPVDFNPSSSHSSLLSLSSSHNHHSLLSVSNASFPSNQTTHHQDQRHVRIMKNRESAVRSRARKQAYRRGLEAEIARLTEENSRLRKQLKELQCSLSSSENTPDRISAPCRTSSSPF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0192 172 PANTHER PROTEIN FD 53 150 - -
Pvu9g0192 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 118 IPR004827 GO:0003700|GO:0006355
Pvu9g0192 172 Coils Coil 116 157 - -
Pvu9g0192 172 MobiDBLite consensus disorder prediction 1 28 - -
Pvu9g0192 172 MobiDBLite consensus disorder prediction 1 45 - -
Pvu9g0192 172 Gene3D - 99 153 - -
Pvu9g0192 172 SUPERFAMILY Leucine zipper domain 101 149 IPR046347 GO:0003700|GO:0006355
Pvu9g0192 172 Pfam bZIP transcription factor 98 148 IPR004827 GO:0003700|GO:0006355
Pvu9g0192 172 MobiDBLite consensus disorder prediction 149 172 - -
Pvu9g0192 172 MobiDBLite consensus disorder prediction 83 102 - -
Pvu9g0192 172 SMART brlzneu 96 160 IPR004827 GO:0003700|GO:0006355
Pvu9g0192 172 CDD bZIP_plant_BZIP46 100 154 - -
Pvu9g0192 172 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 148 IPR004827 GO:0003700|GO:0006355
Pvu9g0192 172 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 53 150 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0192 Pvu-Chr9 3423224 3427367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0192 99 172 bZIP Transcription Factor Family AT3G56850 55.405 3.99e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu9g0192 bZIP_1 4.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0192 K14432 - pvu:PHAVU_009G018700g 272.707