Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0172 ATGCCTCTCTCCAAGCTTCTACTCGCATCCCTTCTGCTATCCTTTCTCCTCTTCCATCTACCTGAAGCTCATCAAACGGTACAAGCACAGACTCGGGATTCTCTTGTTCAGCAGATAGATTGCAACGCTGCATGTGGTGCGAGGTGCCGTTTAGCATCTCGTCAGCGGATGTGTCACAGAGCCTGTGGAACGTGCTGCAGACGCTGCAACTGCGTACCACCGGGAACTTCCGGTAACCAAGAAGTGTGTCCCTGCTATGCCAGTCTCACCACCCACGGTGGCAGACGCAAGTGCCCTTAG 300 0.5433 MPLSKLLLASLLLSFLLFHLPEAHQTVQAQTRDSLVQQIDCNAACGARCRLASRQRMCHRACGTCCRRCNCVPPGTSGNQEVCPCYASLTTHGGRRKCP* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0172 99 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 99 - -
Pvu9g0172 99 Pfam Gibberellin regulated protein 40 99 IPR003854 -
Pvu9g0172 99 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0172 Pvu-Chr9 2916766 2917650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0172 - - gmx:100790448 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0068 1 540402 540934 Pvu9g0172 9 2916766 2917650 PCT
Pvu9g0172 9 2916766 2917650 Pvu1g0070 1 546205 547249 PCT