Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0160 ATGGCAATCTCAATGTCAGAAGGGGGTCTCGCAAAATGCAGCAGAATCAGGCACATTGTCAGGCTCCGCCAAATGCTGCGGCGGTGGCGCAGCAAGGCCCGCTTGTCGGCCCACCGAGGAATACCCTCCGATGTTCCGGCGGGACACGTGGCGGTGTGCGTGGGCAGCAACTCGAGGAGATTCGTGGTGCGCGCCACATACCTGAACCACCCTGTGTTCAAGAAGCTACTGGTTGAGGCGGAGGAAGAGTACGGGTTCTCCAACCACGGTCCTCTCGCCATTCCCTGCGACGAAACACTCTTCGAACAGCTCCTCCGCTTCATTTCACGCTCCAACCGCTCCGACGAATGCCACCTCCCTCTGAGAAACAACCTCGACTTCTGCCTCCAATCTCAACCACTACTCCACTGA 411 0.5839 MAISMSEGGLAKCSRIRHIVRLRQMLRRWRSKARLSAHRGIPSDVPAGHVAVCVGSNSRRFVVRATYLNHPVFKKLLVEAEEEYGFSNHGPLAIPCDETLFEQLLRFISRSNRSDECHLPLRNNLDFCLQSQPLLH* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0160 136 Pfam Auxin responsive protein 21 107 IPR003676 GO:0009733
Pvu9g0160 136 PANTHER SMALL AUXIN-UP RNA-RELATED 11 126 - -
Pvu9g0160 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 11 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0160 Pvu-Chr9 2455480 2456169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0160 10 114 Calmodulin-binding Proteins AT4G34750 56.604 3.35e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0160 K14488 - gmx:100794795 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0160 9 2455480 2456169 Pvu9g0160 9 2455480 2456169 ECH
Pvu1g0084 1 670915 671364 Pvu9g0160 9 2455480 2456169 PCT