Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0157 ATGCGCCGATTGCAAAAATCCAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGCTATTCTTATCAGAAGACTCCCCTTCACAGGTTGGGTTAAATTCTCAAGATCACCTCCAAGCTAAGGCATCATTGGTGTTGCCTCCAGGTGTATCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAGGGAACTCATACTTCAAGTCAGTTTGAGATTAAGCCATCTCAAATACCAGTTATTAAGTGGATTACTCCTCCAAAGATTGTGCTAAATCTCACATGGCAAGTAGTGTGTGGGGAAGAAAGCAACGAGGTAGAGGATCAACGACAGAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGCATATCTTCCATTCCTCCAAACCCTTCCGTTTCAGTGGATGCTGAAGATTCAAATTACACAGACGGGCAACCTGCTTTGATACCAATAACGCCAATTGAAGATGAAGATGCGGCAGCAGAAGCATTAACGGATTCCTTGGAACCATTTGATGCTTCACAATCTCTTGAATTACCTCCTGGTATATTGAAGAATTCAAACTCTGTTACAAGTACGCAATTTGCTCGTGGTCTGACATCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAACATTGTGAAGAGCAACGAACATGGGAAATTGATCGACCATGACTTACTTAATAATATTCTCAACAATCCAGAAGTGATTGAGAAATTGGTTAGAGATTATGGAGCTACTAATAATTCGCAGAGTGTACATAATGTGGCGTCGTCCGGTGCGGTTTTTTCAAATCCTCCTATTCCTATTAATCAAGGAGAAACCGCTACACCTTCATCGATTGCTTTTTCAGCCACTTCTTCCTATGCACCATCTACTGGAGGTCAGGTGGTACCCGTTTCTACCCAATGGCCTCCTAGGCCTGCAGCCAGTTCAGCTATTGTTTCGTCTCCTGTTGAGGTCCCTGCTGCGAAAGATGTTAACTACTATAAGAGTTTAATTCAACAACATGGAGGAGAAAAACAAGAAACACTTCCATACTCCAGTAAACGTCAGATTCATCAGCCAGTAACAAGTTATGAGCCAACATACAATCAAAGAGCTAAAGTGTCAAAACCAAAGATAATGAAGCCTTGTATCTTCTTCAACAGTTCTAGAGGATGTCGGAATGGAGCCAACTGTGCCTACCAGCATGACACATCATTTCAGCCGCGAGGTAATACCGTGCCAGGGATACAAAGTTCAAAGAGGATGAAAATGGATCATGAGATTAGCAGTTAA 1293 0.4246 MRRLQKSKRVSWASDLDLCQVRLFLSEDSPSQVGLNSQDHLQAKASLVLPPGVSGSDDILPPGFEGTHTSSQFEIKPSQIPVIKWITPPKIVLNLTWQVVCGEESNEVEDQRQREMRVLEAIYPRISSIPPNPSVSVDAEDSNYTDGQPALIPITPIEDEDAAAEALTDSLEPFDASQSLELPPGILKNSNSVTSTQFARGLTSDVAAASVALTNIVKSNEHGKLIDHDLLNNILNNPEVIEKLVRDYGATNNSQSVHNVASSGAVFSNPPIPINQGETATPSSIAFSATSSYAPSTGGQVVPVSTQWPPRPAASSAIVSSPVEVPAAKDVNYYKSLIQQHGGEKQETLPYSSKRQIHQPVTSYEPTYNQRAKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDTSFQPRGNTVPGIQSSKRMKMDHEISS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0157 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 425 - -
Pvu9g0157 430 MobiDBLite consensus disorder prediction 409 430 - -
Pvu9g0157 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 425 - -
Pvu9g0157 430 ProSiteProfiles Zinc finger C3H1-type profile. 377 405 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0157 Pvu-Chr9 2421118 2426991 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pvu9g0157 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0157 - - gmx:100783321 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0157 9 2421118 2426991 Pvu9g0157 9 2421118 2426991 ECH