Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0156 ATGGGCAAATCTACCTCCTGCTTCAAGCTAATCACTTGCGGTGGCGATGCGCCTGAGAAAGACGACTACCACCAAGTCTCCGAGGTAAAGGAGTCTAATGATAAACGTGGTTGGAGTTTCCGCAAGAAATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGTCTCCATCTTCGGCAAATAAGGAACATTCAGAAAGTACTAATTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGAGAAGATTTACACAGCAAATTACTCCGATGAGAAGCCCCAGTTATCCTCCTTTGAAAACTCACAAGTAGCAGAAACAAATGTAATTGAATCTGAGAAGAAGGTAGATGTGAATCCACCAGAGTCTGATGTCATCATCATCCAGGCGGCTATTAGGGGGTTATTGGCTCAGAGAGAACTGCTACAGCGTACGAAAGTAGTGAAGTTACAAGCTGCCTTTCGTGGGCACTTGGTCCGGAGGCATGCTCTGGGAACCCTGCGTTGTGTTCAAGCCATCATCAAAATGCAAGTCCTTGTGCGGGCTCGACGTGCTCAGCAGTCACATCTGGAAAATCCTTTAGATCACAAGGACGGCAAAAAGGATTCCTCAGAAGCTTTGGGAAATGAAAATCTGATGACCAAATCAAATGTGAATTACACTTCAATTGAGAAGCTGCTTAGCAATAGGTTTGCTAGTCAGCTGTTGGAATCAACACCAAAGAACAAACCTATCCATGTCAAGTGTGATCCATCTAAAGGCGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCCATATCATCAAAAGATATTGCAAATTGCAATGAAACTAGTTCTCTAACAGAACAGTCAAAGGAAAGCAAGGATAGCGCTTCTGTGTTTCAATTTGAAACGGGTATTCCATCTGAACCCTTTCCCCCAGCTGCTAACACTATACCCACTGTTGAAGATTCACCTCTGCCACCTGAGGATGAAGAAAAGTCGATTACTTATGATCCTAATAACTTTGAGTTTCAAGCAAGCTGCTCCACACCATCTATTGTAAAAGATGACATGGAACAGGTTCCGGCTGAAGAAAAAACTGCATATGATGCCAAAGTTACCTTAGCCGATACCGATTCCTTCCAAAATGACAATTCGGCATCAGATGCAAGTGCCCCACCAGAGCTTTACTCTCTTCGGAAGGGACCTGAAATTGCCCCACCATCTGAACACAGCTCTCTTCATGGGGAGCCTGAAATTGCCCCACCACCAGAGCTTAATTCTTTTTATCAGAAGCCTGAAATTGACAGTGAGCAGAACAAACGATCCATGAAAAGATTTGCTTCAGACCAACTAGAGTCTGAAGGAAAGAAAACTATGAATGGATCAAAAAAGCTCAGTAATCCTGCATTTATCGCGGCACAGTCAAAATTCGAAGAGCTGAGTTCAGTAGCAAATTCAGGTAGGACAAGCAATTTGTCCTACCAAGATTCTGCAGTTGAATCTCAAGGAGACACCTTTTCTGTTGGCAATGATGGTGCATATAAAACAAAAGAGTTTGCATTTGAAAATCCTGCTCTTTATCTTTCTAGGCTTGCTGGTTCTGATTGTGGCACTGAACTCTCCATTTCTTCCACTCTTGATTCACCTGATATATCAGAGCCTGGCGTAATGGAAAGTGAACGAGATGCCAAAGATTTAGTGGAAGGGATTGGTAATATTGAGAACACAATAAACCGTGATGATGAGACCAATGTTTCATCTGCCATCCCAGCTTCTAACCTAGCTACTTCTGTTTTGGATCAGTCAGAGGTTGTGGATGTCATTAGTGGCAATTTGGGTCACTCAGTGGTGGCTGTGGACTCTGGAGAGCCTGCTAATAGTAATACTGAGAAAGATGCATCTGATCTGCAGAGAGAACCAGCAGAGTCTGCTCTGCAAGATTTAAGATCGTCTCCAGAAGCATCACCTAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACCCCTTCAAGTCAAGTGTCTGGGCAACCTAAAGAGAGCAAAATCAACAAGAGTAGATCTGGCAATAAACGTCGGAGTCTATCCTTAAGTAACAAATCTCCTACAACTCCAAATCAAGATTCAGGATCAGGAGGCAGTAGGGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAGTTCCTTTGGCTCAGTAAAGCCTGATCACATTGATCAAGAACCTAGAGATAATAGTACTAACAGTAATTCTGTTCCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCCAAGATTAATGCAAATAACTCTCCAAGATCAAGCCCAGATGTGCATGAACGGGACGTCGAAGTTAAGAAGAGACTTTCCTTACCTGGTGCCGCTGGTAGGCAAGGATCTCCACGTATCCAACGATCAACATCTAAGGCACAGCAGACTGCCAAAGGGAACAATATACATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2484 0.436 MGKSTSCFKLITCGGDAPEKDDYHQVSEVKESNDKRGWSFRKKSARHRVLSNTVIAESPSSANKEHSESTNFNFQPLPEPNVVEKIYTANYSDEKPQLSSFENSQVAETNVIESEKKVDVNPPESDVIIIQAAIRGLLAQRELLQRTKVVKLQAAFRGHLVRRHALGTLRCVQAIIKMQVLVRARRAQQSHLENPLDHKDGKKDSSEALGNENLMTKSNVNYTSIEKLLSNRFASQLLESTPKNKPIHVKCDPSKGDSAWKWLERWMSISSKDIANCNETSSLTEQSKESKDSASVFQFETGIPSEPFPPAANTIPTVEDSPLPPEDEEKSITYDPNNFEFQASCSTPSIVKDDMEQVPAEEKTAYDAKVTLADTDSFQNDNSASDASAPPELYSLRKGPEIAPPSEHSSLHGEPEIAPPPELNSFYQKPEIDSEQNKRSMKRFASDQLESEGKKTMNGSKKLSNPAFIAAQSKFEELSSVANSGRTSNLSYQDSAVESQGDTFSVGNDGAYKTKEFAFENPALYLSRLAGSDCGTELSISSTLDSPDISEPGVMESERDAKDLVEGIGNIENTINRDDETNVSSAIPASNLATSVLDQSEVVDVISGNLGHSVVAVDSGEPANSNTEKDASDLQREPAESALQDLRSSPEASPRSHLTVPESQGTPSSQVSGQPKESKINKSRSGNKRRSLSLSNKSPTTPNQDSGSGGSREQLPKDQQNGKRRSSFGSVKPDHIDQEPRDNSTNSNSVPHFMQATESARAKINANNSPRSSPDVHERDVEVKKRLSLPGAAGRQGSPRIQRSTSKAQQTAKGNNIHPPQERKWLR* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0156 827 MobiDBLite consensus disorder prediction 304 339 - -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 616 827 - -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 376 463 - -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 432 457 - -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 687 727 - -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 742 772 - -
Pvu9g0156 827 Pfam IQ calmodulin-binding motif 149 164 IPR000048 GO:0005515
Pvu9g0156 827 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Pvu9g0156 827 PANTHER IQ-DOMAIN 5-RELATED 1 817 - -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 485 504 - -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 191 212 - -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 191 207 - -
Pvu9g0156 827 SMART iq_5 145 166 IPR000048 GO:0005515
Pvu9g0156 827 SMART iq_5 122 144 IPR000048 GO:0005515
Pvu9g0156 827 PANTHER PROTEIN IQ-DOMAIN 32 1 817 - -
Pvu9g0156 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 190 IPR027417 -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 646 680 - -
Pvu9g0156 827 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Pvu9g0156 827 Gene3D - 125 164 - -
Pvu9g0156 827 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Pvu9g0156 827 Pfam Protein of unknown function (DUF4005) 733 809 IPR025064 -
Pvu9g0156 827 MobiDBLite consensus disorder prediction 798 817 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0156 113 827 IQD Protein Family AT1G19870 35.294 1.84e-103 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0156 - - var:108343123 1480.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0156 9 2412221 2418613 Pvu9g0156 9 2412221 2418613 ECH