Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0149 ATGGCAACAACGGTTATATTTTTCACCCTCAAACTAGTCGCTTTCTTCGCCATCTTTACCATAACCTCAACCACTGCGCAAAACACCACTGTGTTAGAGATTCAAGCCTTAACCGCATTCAAGCGCAACCTCCATGACCCTCTGGGTTCCCTCGACGGTTGGGACCCTTCCACGCCCTCCGCACCCTGCGACTGGCGCGGCATTGTCTGCCACAACAACCGAGTTCACCACCTCCGTCTTCCCCGTCTCCAGCTCGCCGGTGAAATAGCTTCTTCCCTTTCTAATCTCCTCCAACTCCGCAAACTCAGCCTCCACTCCAACAATCTCAACTCCTCCATCCCTCCCTCCCTCTCCCAATGCCTCTTCCTGCGTGCCATTTACCTCCACAACAACCGCCTCTCCGGCCACATTCCTCCGCCGCTTCTCAACCTCACCAACCTCCAAATCCTCAACCTCGCCCGCAATCTCTTCACCGGAAAAATCCCCGACCACCTCTCCGCCTCCCTACGTTTCCTAGACCTCTCCGACAACGCGTTCGCCGGCGACATTCCGGCCAACTTCTCATCCAAATCTCAGCTCCAGCTCATCAACCTCTCATACAACAGGTTCACTGGAGGAATACCTGGCTCCATGGGAACGCTGCAGAATCTTCAGTATCTCTGGTTGGACTCCAACAGCATTCACGGAACCCTACCTTCAGCTATTGCGAACTGTTCCTCTCTGGTGCACCTCACCGCAGAGGATAACGCTCTCATCGGGCTTCTTCCTACCACCCTGGGAACCATGCCGAAGCTTCAGGTGCTTTCTCTTTCGCGGAACCAGTTTTCCGGTTCGGTCCCCACCTCCGTGTTCTGCAACGCGCACCTGCGAAGCGTGAAGCTCGGGTTCAATTCCTTCACGGGGTTTTCTGCGCCGCAAAGTGGGGAATGCGACAGCGTGTTGGAGGTTTTGGATGTTAAAGAGAATCGCATTGTTCACGCGCAGTTTCCCTCGTGGTTGACCCGCGCGACGACGTCGTTGAAGGCTCTTGACCTTTCTGGAAACTTCTTTACCGGTCCTCTCCCAGTTGATATTGGGAACTTTGTAGCGTTGGAGGAGTTTAAAGTCGTGAATAATTTGTTATCCGGTGGAGTTCCGGCTACCATTGTGAAATGCAGGTTGTTAAAGGTTTTTGATCTTGCGGGGAATCGCTTCTCCGGGTTAATTCCTGAGTTTCTCGGGGAAATGAGGAACCTTAAGTACTTTTCTCTTGCCGGTAACTTTTTTACTGGTTCGGTTCCTTCTAGTTTTGGAATGCTTTCTGCGCTCGAAACGCTTAATTTGAGTGATAATGAGTTGACTGGTGTGGTTCCTGAGGAGATCATGAAACTGGGGAACGTGAGTGAATTGAATCTAAGCAATAACAAGTTTTCGGGTGAAGTTTGGTCTAATATTGGAGACATGACCGGTTTGCAAGTTCTTAATTTGAGTCAGTGTGGGTTTTCGGGAAGGGTTCCTGCTTCGTTGGGGAATTTAATGAGACTAACAGTGCTGGATTTGAGCAAGCAGAATCTCTCGGGTGAGTTGCCCCTTGAGGTTTTTGGGTTGCCTAGTCTGCAAGTGGTGGCATTTCAAGAGAATCGTTTGAGGGGTAAAGTTCCCGAGGGGTTCAGCAGCATAGTTAGTCTGCGGTATCTTAATCTCAGCTCTAATGAATATGTTGGTGACATTCCAATAACTTACGGGTTCCTTAGTTCTTTAACGATTCTCTCACTGTCTCACAATGGTGTTTCTGGTGAAATACCTCCCGAGATTGGTGGTTGTTCGGAACTTGAAGTGTTGCAGCTGCAATCAAATTTTTTAGAGGGTAATATTCCGGGTGACATCTCTCGGCTCTCTCATTTAAAGGAGCTTAATTTGGGGCACAATAGGTTGAAAGGTGATATCCCAAATGAGATATCAGAGTGTGCTGCCATGAGTTCCCTCTTATTGGATGGTAATCACTTCACGGGTCACATTCCAGGTTCCTTGTCAAAACTGTCTAATTTGACCGTGTTGAATCTTTCTTCAAATCTTTTGAAAGGGAAAATTCCGGTTGAACTGTCAAGCATTTCTGGGTTGGAGTATTTAAATGTGTCTAGTAATAATCTTGAGGGTGAGATTCCATACACGCTTGGTGTTAGATTCAATAACCCTTCCGTGTTTTCAATGAACCAAGGTTTATGCGGGAAGCCGTTGCAGAGAGAATGTGCAAAGGTGAGAAGGAGAAGGAAGAGAAGGCTAATAATGTTGATAGGCGTGGGAGTGGGTGGTTTATGCCTTTTGGCGTTGTGTTGTTGTGGGTATGTTTACAGCCTGTTGAGATGGCGGAAGAAGCTTCGAGAAGGGGTGACGGGTGAGAAGAAAAGGAGCCCCTCAACAAGTGCAGGTAGCAGAGGGAGTGGGGAAAACGGAGGACCAAAGCTGGTGATGTTCAACAACAAGATCACGTACGCGGAGACATTGGAAGCGACGAGAAACTTCGATGAAGAGAACGTGTTAAGCAGGGGAAGATATGGCCTGGTGTTTAAAGCCTCCTTCCAAGATGGAATGGTTCTCTCAATTCGTCGCTTCGTTGATGGGTTCTTAGACGAGGTTAACTTCCGCAAGGAAGCAGAATCACTGGGCAAAGTGAAACATCGAAACTTAACAGTCCTGCGTGGTTACTATGCAGGCCCACCCGATGTGAGACTTCTTGTGTATGACTACATGCCCAATGGAAACCTTGGCACACTGCTTCAAGAGGCGTCTCAGCAAGATGGTCATGTGCTGAATTGGCCAATGCGTCATCTCATTGCACTGGGAATTGCTCGAGGGCTAGCTTTCTTGCACTCGGTGCCAATAGTTCATGGTGATGTGAAGCCTCAAAATGTTCTTTTTGATGCGGATTTTGAAGCCCATTTGTCTGAATTTGGATTGGAGCGGTTGACAGTAGCAGCAGCCGCAGAAGCATCGTCGTCGTCGACTCCAGTGGGGTCCTTAGGGTATGTTTCAGCAGAAGCTGTATCGAGTGGGGTGGCTACAAAGGAGGGTGATGTTTATAGCTTTGGGATAGTGTTGTTGGAGATACTAACGGGGAAGAAACCGGTGATGTTCACGGAGGATGAGGACATAGTGAAGTGGGTGAAGAAGCAGTTACAGAGGGGCCAAATATCGGAGTTGTTGGAGCCAGGGTTGCTTGAGCTGGACCCAGAGTCATCGGAATGGGAAGAGTTTTTGTTGGGTGTGAAAGTGGGTCTCCTATGCACGGCAACGGATCCTCTTGATCGACCGTCTATGTCTGACGTTGCTTTCATGCTCCAAGGTTGCCGGGTCGGACCGGAAATCCCATCATCAGCTGATCCCACAACACTACCTTCTCCTGCTTGA 3387 0.4901 MATTVIFFTLKLVAFFAIFTITSTTAQNTTVLEIQALTAFKRNLHDPLGSLDGWDPSTPSAPCDWRGIVCHNNRVHHLRLPRLQLAGEIASSLSNLLQLRKLSLHSNNLNSSIPPSLSQCLFLRAIYLHNNRLSGHIPPPLLNLTNLQILNLARNLFTGKIPDHLSASLRFLDLSDNAFAGDIPANFSSKSQLQLINLSYNRFTGGIPGSMGTLQNLQYLWLDSNSIHGTLPSAIANCSSLVHLTAEDNALIGLLPTTLGTMPKLQVLSLSRNQFSGSVPTSVFCNAHLRSVKLGFNSFTGFSAPQSGECDSVLEVLDVKENRIVHAQFPSWLTRATTSLKALDLSGNFFTGPLPVDIGNFVALEEFKVVNNLLSGGVPATIVKCRLLKVFDLAGNRFSGLIPEFLGEMRNLKYFSLAGNFFTGSVPSSFGMLSALETLNLSDNELTGVVPEEIMKLGNVSELNLSNNKFSGEVWSNIGDMTGLQVLNLSQCGFSGRVPASLGNLMRLTVLDLSKQNLSGELPLEVFGLPSLQVVAFQENRLRGKVPEGFSSIVSLRYLNLSSNEYVGDIPITYGFLSSLTILSLSHNGVSGEIPPEIGGCSELEVLQLQSNFLEGNIPGDISRLSHLKELNLGHNRLKGDIPNEISECAAMSSLLLDGNHFTGHIPGSLSKLSNLTVLNLSSNLLKGKIPVELSSISGLEYLNVSSNNLEGEIPYTLGVRFNNPSVFSMNQGLCGKPLQRECAKVRRRRKRRLIMLIGVGVGGLCLLALCCCGYVYSLLRWRKKLREGVTGEKKRSPSTSAGSRGSGENGGPKLVMFNNKITYAETLEATRNFDEENVLSRGRYGLVFKASFQDGMVLSIRRFVDGFLDEVNFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVPIVHGDVKPQNVLFDADFEAHLSEFGLERLTVAAAAEASSSSTPVGSLGYVSAEAVSSGVATKEGDVYSFGIVLLEILTGKKPVMFTEDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTATDPLDRPSMSDVAFMLQGCRVGPEIPSSADPTTLPSPA* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0149 1128 ProSiteProfiles Protein kinase domain profile. 834 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0149 1128 PANTHER LRR RECEPTOR-LIKE KINASE 2 1124 - -
Pvu9g0149 1128 Gene3D Phosphorylase Kinase; domain 1 809 909 - -
Pvu9g0149 1128 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1124 - -
Pvu9g0149 1128 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Pvu9g0149 1128 Pfam Leucine rich repeat 653 710 IPR001611 GO:0005515
Pvu9g0149 1128 Pfam Leucine rich repeat 507 564 IPR001611 GO:0005515
Pvu9g0149 1128 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
Pvu9g0149 1128 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Pvu9g0149 1128 Gene3D Transferase(Phosphotransferase) domain 1 910 1114 - -
Pvu9g0149 1128 MobiDBLite consensus disorder prediction 791 814 - -
Pvu9g0149 1128 Pfam Leucine Rich Repeat 627 649 IPR001611 GO:0005515
Pvu9g0149 1128 SUPERFAMILY L domain-like 506 719 - -
Pvu9g0149 1128 SMART serkin_6 834 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0149 1128 Pfam Protein tyrosine and serine/threonine kinase 838 1053 IPR001245 GO:0004672|GO:0006468
Pvu9g0149 1128 Gene3D Ribonuclease Inhibitor 168 459 IPR032675 -
Pvu9g0149 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 954 966 IPR008271 GO:0004672|GO:0006468
Pvu9g0149 1128 SMART LRR_typ_2 144 168 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 433 456 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 457 481 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 529 552 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 262 286 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 96 120 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 577 601 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 625 649 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 673 697 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 409 432 IPR003591 -
Pvu9g0149 1128 SMART LRR_typ_2 214 238 IPR003591 -
Pvu9g0149 1128 Gene3D Ribonuclease Inhibitor 32 167 IPR032675 -
Pvu9g0149 1128 SUPERFAMILY L domain-like 33 302 - -
Pvu9g0149 1128 SUPERFAMILY Protein kinase-like (PK-like) 813 1117 IPR011009 -
Pvu9g0149 1128 Gene3D Ribonuclease Inhibitor 460 746 IPR032675 -
Pvu9g0149 1128 SUPERFAMILY L domain-like 312 571 - -
Pvu9g0149 1128 ProSiteProfiles Leucine-rich repeat profile. 627 649 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0149 Pvu-Chr9 2290320 2294454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0149 1 1128 Receptor kinase-like Gene Family AT1G75640 62.259 0.0 1325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pvu9g0149 PK_Tyr_Ser-Thr 5.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0149 - - gmx:100801571 1883.23