Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0124 ATGGAGGCAGAGCATCATCAAGAAGCCTCAAACACTATTGGAAGCCTTTACGTTAAAGTAATGACCGACGAACAAATGGAACTGCTGAGGCAACAGATATCTGTTTACGCCACCATCTGCGAGCAGCTTGTGGAGATGCACAAAGCCGTAACCACCCAACAGGACCTCGCAGGGCTGAGGCTGGGTAATTTGTACTGTGATTCGTTGATGGCGTGTTCTGGACACAAGATAACTGCGAGGCAGCGTTGGACTCCAACGCCTCTGCAGCTTCAAATTCTGGAACGTATTTTTGATGAGGGGAATGGCACTCCAAGTAAGCAGAAGATCAAGGAGATAGCCATTGAACTGGGCCAACATGGCCAAATATCAGAGACAAATGTTTATAACTGGTTCCAGAACAGAAGAGCTCGATCAAAGAGGAAGCAACTCGCTCCCGCATCGAATGTTGAGCCAGAAGCCGACACAGAAGTTGAGTCTCCACGAGAGAAAAAATTACGCGCCGAAAGCGTTCAGGTTATTCAACCCTTTGAGAATTCATCATCATCACCTCATAGGATCAAGGATATGTACATCCACAGTCCTGACTTAGGATTTGAGCAATTGATGAGTAAAATAGAAGTTGCAGGGTGTTACAGCTCTTATTTTCTTTGA 651 0.4593 MEAEHHQEASNTIGSLYVKVMTDEQMELLRQQISVYATICEQLVEMHKAVTTQQDLAGLRLGNLYCDSLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKEIAIELGQHGQISETNVYNWFQNRRARSKRKQLAPASNVEPEADTEVESPREKKLRAESVQVIQPFENSSSSPHRIKDMYIHSPDLGFEQLMSKIEVAGCYSSYFL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0124 216 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 216 - -
Pvu9g0124 216 Gene3D - 81 145 - -
Pvu9g0124 216 CDD homeodomain 80 142 IPR001356 GO:0003677
Pvu9g0124 216 MobiDBLite consensus disorder prediction 139 163 - -
Pvu9g0124 216 SMART HOX_1 78 145 IPR001356 GO:0003677
Pvu9g0124 216 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
Pvu9g0124 216 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 216 IPR044559 GO:0003700
Pvu9g0124 216 Pfam Homeodomain 80 140 IPR001356 GO:0003677
Pvu9g0124 216 SUPERFAMILY Homeodomain-like 79 142 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0124 Pvu-Chr9 1939877 1941301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0124 16 214 Wox Gene Family AT4G35550 53.744 1.62e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu9g0124 Homeodomain 1.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0124 - - pvu:PHAVU_009G012200g 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0124 9 1939877 1941301 Pvu9g0124 9 1939877 1941301 ECH