Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0118 ATGAGTTGTTTTTCCTGCTTTGTTTCTCGCCGGAAAGATGTCAGGAGGGTTGAAATTGACAATGGCGCTCGATCTGCTGCTACTGCTGCCTCCTCAGAGGGTGAAAGGAAGAGAGAATCCTCAGAGGCAAAGGGGAAGAGTGTTAGCAGTAGTAAAGGAAGTACTGCAGCGGCTAGTTTTGGTTTTCGCGAACTTGCTGCGGCAACGAGGGGTTTCAAGGAAGTGAATTTAATCGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGTCGACTTTCAACGGGCGAGCTTGTTGCCGTGAAACAATTGAGTCATGATGGTCGGCAAGGTTTTCAGGAATTTGTTACGGAGGTTCTTATGTTGAGCCTGCTGCACCATTCTAATCTTGTGAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCCATGGGTTCACTGGAGGATCATCTTTTTGATCCTACCCAAGACAAAGAACCCCTAAGTTGGAGTTCTCGAATGAAGATTGCTGTTGGAGCTGCTCGTGGCCTCGAGTATCTCCATTGTAAAGCAGATCCACCTGTTATCTACAGAGACTTGAAATCTGCTAACATCTTGTTAGATAATGAATTCAACCCAAAACTGTCAGATTTTGGGCTTGCTAAACTTGGACCTGTTGGAGACAATACCCATGTTTCAACCAGAGTAATGGGAACATATGGCTACTGTGCGCCCGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATATACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGAGCAATAGATGCCAGTAGAAAACCAGGAGAGCAAAACTTGGTTTCATGGTCTCGCCCATATTTTAGTGATCGGAGAAAGTTTGTACATATGGTAGACCCTCTTTTACAAGGCAACTTCCCCTTGCGCTGTTTGCATCAGGCAATTGCAATAACTGCTATGTGTCTCCAGGAGCAACCAAAATTCCGTCCACTTATTGGTGATATTGTTGTTGCACTGGAATACCTAGCTTCTCAGAGTATTGCTGAAGTGCATAGACATGGTGGGCGCAGCTCACCGCAACAACCATCTTCTGAAATCGATAGAAATTAA 1128 0.4477 MSCFSCFVSRRKDVRRVEIDNGARSAATAASSEGERKRESSEAKGKSVSSSKGSTAAASFGFRELAAATRGFKEVNLIGEGGFGRVYKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPTQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDASRKPGEQNLVSWSRPYFSDRRKFVHMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSIAEVHRHGGRSSPQQPSSEIDRN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0118 375 PANTHER OS07G0668900 PROTEIN 1 366 - -
Pvu9g0118 375 PANTHER OS07G0668900 PROTEIN 1 366 - -
Pvu9g0118 375 SMART serkin_6 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0118 375 Pfam Protein kinase domain 72 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0118 375 CDD STKc_IRAK 78 346 - -
Pvu9g0118 375 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Pvu9g0118 375 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0118 375 Gene3D Transferase(Phosphotransferase) domain 1 148 363 - -
Pvu9g0118 375 MobiDBLite consensus disorder prediction 31 45 - -
Pvu9g0118 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pvu9g0118 375 SUPERFAMILY Protein kinase-like (PK-like) 53 346 IPR011009 -
Pvu9g0118 375 MobiDBLite consensus disorder prediction 19 53 - -
Pvu9g0118 375 Gene3D Phosphorylase Kinase; domain 1 29 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0118 Pvu-Chr9 1893143 1897821 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0118 1 371 Glycoside Hydrolase AT3G07070 57.853 1.71e-153 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pvu9g0118 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0118 - - gmx:100796595 602.053