Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0114 ATGATGAGAGATGGTGATGTGACATCATCATCTGCTACCATGATGGAAGCTTCACCACCTGATGGAACAACAACTTCAATGGATTTTGACTACATGGGTGAGCTTTTCTACGATGGGTGCTGGTTTGAAGCCTCTGTTGATGGATCTGACTTCTTGCTGCAAAGTCCTTCCTATTCCAATCCCCTCTTTGACCCTTCATTCTCCTGGCCTGCCTTGGAGACCAACCACAATGAATCCCAGGGTGCTGCTTTCGGGACACAAGAAGAAGGCCACAACAACAATGTTGTTGCTGCTCGTGGAGGTGGCGGTGGTGGTCAACAGTTTCAGCCTGAAACTATTTCAATTGAAGGAGCATCTGATGGGGTCAGAAGATGGAGGTTTGCACCCACACCTAGTCCAGCACCTGGACCTTCCATAATGGAGAAGCTGGTAAGGGCCCTCATGAGGATCAAAGACTACAATAGGAACAAAAATATGCTTATACAGATATGGGTGCCGGTTCATAGAGGGGGTAGGCCGATTCTCGCAGCTAATGATATTCTGTTCTCACTCGATTCAAGGTCTATGAACCTTGCAAAGTACCGCGAAATCTCTGTGAGGTATGAGTTTTCTGCTGAGGAGGGTGAGGTCAAGGAGTTGGTGCCAGCAGAGGAGGGTGACTCCAAGGAATTGGTGCTAGGATTGCCCGGTAGAGTGTTTAGGGACAAGGTTCCTGAGTGGACTCCTGATGTTAGATTCTTTAGGAGTGACGAGTACCCGCGACTTGACCATGCTCAAGAGTATGATGTGAGTGGGTCACTAGCGGTTCCAATCTTTGAGCAAGGGAGCAAGATGTGCTTGGGAGTTATTGAGGTCGTGATGACTACTCAGCAGATCAACTATGGTCCTGAACTTGAGAGTGTTTGCAAAGCACTTGAGGCTGTTGATCTTAGAAGCTCAAAACAATTAAGTATTCAGAATGTGAAGGCATGCAACAGGTCCTACGAAGCTGTACTACCTGAGATTCAACAGGTGTTGAGATCTGCATGTGAAATGCATAAATTACCTTTAGCTCAAACTTGGATTCCATGTGTTCAACAAGGCAAAGAGGGGTGCCGGCACTCTGAAGATAATTATCTATTTTGTATATCTCCTGCAGAGCATGCTTGCTATGTTGGTGATCCCAAAATCAGGTCTTTTCACGAGTCTTGCACCGAGCATCACTTGTTGAAGGGTGAAGGTGTTGCTGGGGGAGCTTTTATGACCAACCAACCATGTTTCTCAGATGACATAACTTCCTTAAGCAAGAAAGACTATCCACTGTCTCATCATGCGAGGTTGTTTGGATTGCGTGCTGCTGTTGCCATACGCCTCCGAAGCATCTACAACAGCACAGATGACTTTGTTTTAGAGTTCTTCTTGCCGGTTGATTGCAATGACAGTGAAGAGCAGAGAAAAATGCTTACATCATTGTCCATCATCATACAAAGGGTTTGTCGCAGCTTGCGGGTTATAAGTGATAAAGAATTGGTGGAAGCTAAGTTGTCAATTGATGAAGGGATATCCCTAGCAGATAGTGGATTTGATAGGACTGCAATTTGTGAGGAACTTCAACACAAAGGGACGGTTGCCTCGTTGGATACTGAAGAAAAATTAAGTGAAACAACTGGTAGAAAGTTCTCTGACCCAATGCGGCAACAAAAAAGTCCTATTTTAAAAGGAAACCTTGACTGTGTCAGGGAGAGTTCTACTTCTGTTGAGGGTAACTTATCAAGTGTGGGAATGAGTAAAATGGGAGACAGAAGACGGGCCAAAGCAGAGAAAACTATCACTTTGCAAGTTCTTAGACAATATTTTGCTGGAAGCCTAAAAGACGCTGCAAAGAATATCGGTGTGTGTACTACAACCTTGAAAAGGATCTGCCGGCAACACGGGATAAAGCGTTGGCCATCCCGAAAGATAAAAAAGGTTGGTCACTCCTTACAGAAACTTCAACTTGTGATTGACTCGGTTCAAGGTGCCTCTGGGGCATTTCAAATCGATTCCTTCTATTCAAACTTCCCAGACCTAGCTTCTCCAAACTTATCAGGAACCACACTGTTCTCAACTTTCAATCAAACTGATAATCCAAACTCAATAAGCACGCAGCCAGATCCTGGTGCATTGAGTCCAGAAGGCACGTCAAAATCTCCCTCTTCATCCTGCGGTCAGAGTTCCATTTCCAGCCATTCCTACTCCAGCATGTCAGAGCTACAGCAGCTTCACACAACTAACATTGCCGGTAAGAAAGATTCCACCACGGCTGGTGAAGATTCTGCTGTTGTTGCGTTGAAGAGGATCAGAAGCGAAGCAGAGCTTAAAAGCCTGAATCAGGATAAAGCAAAGCTCTTGCCAAGATCACTAAGCCAGGAAACACTTGGTGAGCACCCAAAAAATCAGTATCAACGACCCTTGTTGAAAACAAGTAGCAAGGTGGATGCTCACAGAGTGAAAGTCACATATGGTGATGAGAAAACTCGGTTTCGGATGCCCAAGAACTGGGGCTATGAAGATCTTCTGCAGGAAATTGGTGGGAGATTTAACGTGAGTGACATGAAGAAGTTTGATGTGAAATACTTGGATGATGACTGTGAGTGGGTACTACTCACTTGTGATGCTGACTTAGAGGAATGCATTGATGTTTGTCAATCTTCTGAAAGTGGCACCATCAAACTAAGCCTACAAACTTCTACTCATAGTATGAGAAGTTCTTTAGAATTTAGATAA 2745 0.4474 MMRDGDVTSSSATMMEASPPDGTTTSMDFDYMGELFYDGCWFEASVDGSDFLLQSPSYSNPLFDPSFSWPALETNHNESQGAAFGTQEEGHNNNVVAARGGGGGGQQFQPETISIEGASDGVRRWRFAPTPSPAPGPSIMEKLVRALMRIKDYNRNKNMLIQIWVPVHRGGRPILAANDILFSLDSRSMNLAKYREISVRYEFSAEEGEVKELVPAEEGDSKELVLGLPGRVFRDKVPEWTPDVRFFRSDEYPRLDHAQEYDVSGSLAVPIFEQGSKMCLGVIEVVMTTQQINYGPELESVCKALEAVDLRSSKQLSIQNVKACNRSYEAVLPEIQQVLRSACEMHKLPLAQTWIPCVQQGKEGCRHSEDNYLFCISPAEHACYVGDPKIRSFHESCTEHHLLKGEGVAGGAFMTNQPCFSDDITSLSKKDYPLSHHARLFGLRAAVAIRLRSIYNSTDDFVLEFFLPVDCNDSEEQRKMLTSLSIIIQRVCRSLRVISDKELVEAKLSIDEGISLADSGFDRTAICEELQHKGTVASLDTEEKLSETTGRKFSDPMRQQKSPILKGNLDCVRESSTSVEGNLSSVGMSKMGDRRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGAFQIDSFYSNFPDLASPNLSGTTLFSTFNQTDNPNSISTQPDPGALSPEGTSKSPSSSCGQSSISSHSYSSMSELQQLHTTNIAGKKDSTTAGEDSAVVALKRIRSEAELKSLNQDKAKLLPRSLSQETLGEHPKNQYQRPLLKTSSKVDAHRVKVTYGDEKTRFRMPKNWGYEDLLQEIGGRFNVSDMKKFDVKYLDDDCEWVLLTCDADLEECIDVCQSSESGTIKLSLQTSTHSMRSSLEFR* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0114 914 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g0114 914 SMART PB1_new 820 903 IPR000270 GO:0005515
Pvu9g0114 914 PANTHER PROTEIN NLP4 24 910 - -
Pvu9g0114 914 PANTHER PROTEIN NLP8 24 910 IPR045012 GO:0003700
Pvu9g0114 914 Pfam RWP-RK domain 602 650 IPR003035 -
Pvu9g0114 914 ProSiteProfiles PB1 domain profile. 820 903 IPR000270 GO:0005515
Pvu9g0114 914 SUPERFAMILY CAD & PB1 domains 819 905 - -
Pvu9g0114 914 Gene3D - 818 902 - -
Pvu9g0114 914 ProSiteProfiles RWP-RK domain profile. 589 670 IPR003035 -
Pvu9g0114 914 MobiDBLite consensus disorder prediction 694 741 - -
Pvu9g0114 914 Pfam PB1 domain 821 902 IPR000270 GO:0005515
Pvu9g0114 914 CDD PB1_NLP 821 901 IPR034891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0114 Pvu-Chr9 1825157 1829690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0114 15 905 NLP Transcription Factor Family AT1G20640 47.845 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pvu9g0114 PB1 1.2e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0114 - - gmx:100785135 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0114 9 1825157 1829690 Pvu9g0114 9 1825157 1829690 ECH