Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0060 ATGGCTTCGTCGAGTGGAACATCTTCGGGGTCGTCTCTGCTTCAGAATTCGGGTTCAGAGGAGGACCTGCAGGCTGTGATGGATGAGAGGAAGAGGAAGAGAATGATATCGAACCGCGAATCGGCGAGGCGATCCCGAATGAGGAAGCAGAAGCACATGGATGATCTGGCATCACTGGTGACTCAGCTGAGAAACGAGAATCACCAGATTCTGACATCGGTGAACCTCACCACCCAGAAGTACTTGGCGGTGGAGTCTGAGAACTCGGTGCTGAGAGCCCAAGTGAGCGAGTTGAGCCACAGGTTAGAGTCTCTGAACGAGATCACCAATTTCTTGAACGCCACTAATGGTGTCTTTGGGCCTCCGGGCCCATCAACAACCTGCTTCCTTGAGCCCGAGGGTAGCGCCTTCTTCAACAACCCTTTCAACATGGCATATCTCAGCCAACCGATCATGGCTTCTGCAGATATGTTGCAGTACTGA 483 0.5259 MASSSGTSSGSSLLQNSGSEEDLQAVMDERKRKRMISNRESARRSRMRKQKHMDDLASLVTQLRNENHQILTSVNLTTQKYLAVESENSVLRAQVSELSHRLESLNEITNFLNATNGVFGPPGPSTTCFLEPEGSAFFNNPFNMAYLSQPIMASADMLQY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0060 160 Pfam bZIP transcription factor 30 81 IPR004827 GO:0003700|GO:0006355
Pvu9g0060 160 Coils Coil 88 108 - -
Pvu9g0060 160 MobiDBLite consensus disorder prediction 23 51 - -
Pvu9g0060 160 MobiDBLite consensus disorder prediction 1 51 - -
Pvu9g0060 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pvu9g0060 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pvu9g0060 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
Pvu9g0060 160 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Pvu9g0060 160 MobiDBLite consensus disorder prediction 1 22 - -
Pvu9g0060 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pvu9g0060 160 Gene3D - 28 83 - -
Pvu9g0060 160 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Pvu9g0060 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0060 Pvu-Chr9 1006284 1006766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0060 24 160 bZIP Transcription Factor Family AT4G34590 53.957 1.83e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu9g0060 bZIP_1 2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0060 K25786 - gmx:778171 215.312