Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0048 ATGATCATTTCGGAGAAGAACCGTAAGGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCATCCTGAGATTGATGTGCCTAATTTGCAGGTGATTAAGCTTATGCAAAGCTTCAAATCTCGCGAGTACGTGAGGGAGACCTTCGCTTGGATGCATTATTACTGGTTTCTCACCAACGACGGCATCGAGTTTCTGAGAACTTACCTTAACCTTCCTTCCGAAATTGTGCCTGCCACTTTGAAGAAACAGGCCAAGCCACCTGGCAGACCCTTTGGTGGCCCATCCAGTGATCGCCCTAGGGGTCCACCTCGCTTTGAAGGCGAGAGGAGGTTTGGCGGTGATCGCGACGGATATCGTGGAGGTCCCCGAGGAGCTGGTGGAGACTTTGGAGGAGACAAAGGAGGAGCTCCTGCTGACTACAGGCCATCTTTTGGGGGACCTGGAGGAAGGCCTGGCTTTGGTCGTGGATCTGGTGGTTTTGGGGCGCCCACCAGCTCAAATACTCCTTAA 543 0.5193 MIISEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPSSDRPRGPPRFEGERRFGGDRDGYRGGPRGAGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNTP* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0048 180 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 178 - -
Pvu9g0048 180 MobiDBLite consensus disorder prediction 91 180 - -
Pvu9g0048 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Pvu9g0048 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 178 IPR037447 -
Pvu9g0048 180 MobiDBLite consensus disorder prediction 112 128 - -
Pvu9g0048 180 Gene3D - 1 104 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0048 Pvu-Chr9 863961 865922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0048 1 180 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 77.222 4.66e-77 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0048 K02947 - gmx:100500445 227.639