Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0025 ATGCACGTGGTTATCCCCTGGTCATGGCCCTCTCATGGGTCGTATCTGTCCCAGGGTCTCCCAGCAGTGGTGTGGATACTTCACGAGTCAGGTTTACCCCCTACTGATCTATCCGACGTCGTTGCAGATCCATCAACGGTCATGGCTGGCTTCAGCGGTGATGAAACGGCACCGTTTTTCGGCTTCCTCGGAGCCGCAGCTGCCCTCGTCTTCTCCTGCATGGGAGCTGCCTATGGAACAGCAAAGAGTGGTGTGGGCGTGGCTTCCATGGGTGTAATGAGACCTGAGCTAGTGATGAAGTCTATTGTTCCAGTTGTTATGGCTGGAGTTTTGGGTATTTATGGCCTTATTATTGCTGTTATTATTAGTACCGGTATTAATCCAAAGGCCAAATCTTATTACCTCTTTGATGGTTACGCACATCTCTCCTCTGGTCTTGCCTGTGGCTTGGCTGGGCTGTCTGCTGGCATGGCTATTGGTATTGTTGGTGATGCTGGTGTTAGAGCCAATGCACAGCAACCAAAACTTTTTGTTGGAATGATTCTCATCCTCATTTTTGCTGAAGCTCTTGCCCTCTATGGTCTCATTGTTGGTATTATCCTGTCTTCTCGTGCTGGCCAGTCTAGAGCCGACTAA 636 0.4969 MHVVIPWSWPSHGSYLSQGLPAVVWILHESGLPPTDLSDVVADPSTVMAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0025 211 Gene3D - 57 208 IPR035921 -
Pvu9g0025 211 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 49 211 - -
Pvu9g0025 211 SUPERFAMILY F1F0 ATP synthase subunit C 133 202 IPR035921 -
Pvu9g0025 211 CDD ATP-synt_Vo_c_ATP6C_rpt2 135 202 - -
Pvu9g0025 211 PRINTS Vacuolar ATP synthase 16kDa subunit signature 76 100 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pvu9g0025 211 PRINTS Vacuolar ATP synthase 16kDa subunit signature 102 126 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pvu9g0025 211 PRINTS Vacuolar ATP synthase 16kDa subunit signature 153 179 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pvu9g0025 211 PRINTS Vacuolar ATP synthase 16kDa subunit signature 180 203 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pvu9g0025 211 SUPERFAMILY F1F0 ATP synthase subunit C 60 123 IPR035921 -
Pvu9g0025 211 Pfam ATP synthase subunit C 63 122 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pvu9g0025 211 Pfam ATP synthase subunit C 143 201 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pvu9g0025 211 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 59 167 IPR011555 GO:0033179|GO:0046961|GO:1902600
Pvu9g0025 211 CDD ATP-synt_Vo_c_ATP6C_rpt1 59 126 - -
Pvu9g0025 211 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 49 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0025 Pvu-Chr9 475161 478186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0025 48 211 Primary Pumps ATPases(2) AT2G16510 98.171 2.99e-110 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0025 K02155 - gmx:100812380 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0025 9 475161 478186 Pvu9g0025 9 475161 478186 ECH