Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g3021 ATGATGGATAACGAGGTGTTAGAATTTGATATTGGGTTGGGAGGAGGCGAGGGAGAGTATGACGATGACGGAGGGGACATCGAACACCCAATTGAGGAGGATGAATTGGGGGATAGCAGTGGGGGTGGCGCTGTAGCCACTGGAATATATCTTCCCGAGGGAGACCTCTCAGATCTGGAACCTTCCGAGGGCATGGAATTCGAGTCTGAAGAGGCTGCTAAGGCCTTCTACAATTCCTATGCCCGTCGTGTTGGGTTTAGTACTCGTGTGAGCTCATCACGTCGTTCCAGGCGCGATGGAGCTATCATACAGAGGCAATTTGTTTGCGCTAAGGAGGGTTTTCGCAACTTGAATGAGAAGCGCACGAAGGATAGAGAGATCAAGCGCCCCCGAACCATTACTAGAGTCGGATGTAAGGCTTCTTTGTCTGTCAAAATGCAAGACTCTGGCAAGTGGGTCGTGTCTGGGTTTGTTAGAGAACATAATCACGAACTGGTTCCCCCTGACCAGGTTCATTGTCTTCGCTCTCACCGCCAAATATCAGGCGCTGCTAAGACTCTCATTGATACTTTGCAGGCTGCTGGGATGGGTCCTCGTAGAATTATGTCAGCACTTATTAAAGAGTATGGTGGGATTAGCAAAGTCGGCTTCACCGAGGTCGACTGTAGGAACTACATGAGGAATAATAGGCAGAGAAGTTTAGAAGGTGACATTCAACTTGTTCTCGATTATTTGAGACAAATGCACTCCGAAAACCCTAATTTCTTCTATGCTGTGCAAGGGGATGAGGATCAGTCCGTCAACAATGTTTTCTGGGCTGATCCCAAGGCAAGAATGAATTATACATTTTTTGGTGATACTGTTACTTTTGACACTACATACCGATCTAATAGGTATCGCTTACCATTTGCTCCCTTTACCGGTGTAAACCATCATGGGCAGCCTGTTCTTTTCGGTTGTGCCTTCCTAATTAATGAATCTGAAGCATCATTTGTGTGGCTTTTCAAGACTTGGCTTATGGCCATGTCTGGACGTCCACCAGTGTCAATAACAACTGATCATGATTCTGTTATTCGATCAGCCATTATACAAGTGTTCCCGGATACCCGGCACCGCTTCTGCAAGTGGCACATCTTTAAAAAATGCCAGGAGAAATTATCTCATATTTTCCTCAAATATCCAAATTTTGAAGCTGAATTTCACAAATGCGTTAACTTGACTGAGTCAATTGAGGAATTTGAGTCTTGTTGGTCAACACTTGTAGATAAATATGATCTCAGGGACCATGAATGGCTTCAAGCAATATATTCTGCTTGCAGGCAGTGGGTACCTGTATATTTGCGAGACACATTCTTTGCAGAAATGTCCATCACTCAGCGAAGTGATAGCATGAACTCTTACTTTGATGGATATATAAATGCTTCAACCAATTTAAATCAGTTCTTTAAGCTTTATGAGAAAGCACTTGAAAGTCGCAATGAGAAGGAAGTGAGAGCTGATTATGACACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTTTACACGAGAAAAATTTTCATGAGGTTCCAGGAGGAGTTAGTTGGTACACTAACATTCATGGCATCCAAAGCTGATGATGACGGGGAGGTCATTACATATAATGTAGCTAAATTTGGAGAGGAACATAAAGGGTACTATGTTAAATTTAATGTTTTGGAGATGAAAGCAACTTGTAGTTGCCAAATGTTTGAGTTTTCAGGCCTTCTTTGCAGACATGTTTTGGCAGTCTTTAGAGTTACCAATGTGCTTACTCTCCCATCTCATTATATATTGAAACGTTGGACAAGAAATGCAAAGAGTAATGTAATATTAGAAGAACATTCTTGTGATGTATATACTTACTATTTGGAATCTCATACAGTTAGATATAACACCCTTCGACATGAGGCCTTTAAATTTGTTGATGAAGGCGCTCAGTCTGCTGAAACTTATGATGTTGCAATGGATGCTTTACAAGGAGCTGCAAAAAGAGTTTCTCAGGCAATGCAAAATGAGGGAAGAATTCCTATCAGTAATGGAAAATTAAGGAGTCATGTGCTGAATGATGAAAGTCGTGTTAATTACACAAGTGCATGCCAGGAAGAATGCTTGAGCCAACATACGTCTAAGGATGATTTGGATACAAATATTAGAAAACTCCTGAATGAGCTTGAGTGTGCAAATCGAAAGTGTGAAATTTATCGGTCCAACCTGCTTTCAGTTTTGAAAGCCGTTGAGGATCACAAGTTACAGTTGTCTGTTAAGGTGGAAAATATCAAAATAAGCATGAAAGATGGCATCTAA 2352 0.4188 MMDNEVLEFDIGLGGGEGEYDDDGGDIEHPIEEDELGDSSGGGAVATGIYLPEGDLSDLEPSEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHSENPNFFYAVQGDEDQSVNNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGRPPVSITTDHDSVIRSAIIQVFPDTRHRFCKWHIFKKCQEKLSHIFLKYPNFEAEFHKCVNLTESIEEFESCWSTLVDKYDLRDHEWLQAIYSACRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYINASTNLNQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKADDDGEVITYNVAKFGEEHKGYYVKFNVLEMKATCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDEGAQSAETYDVAMDALQGAAKRVSQAMQNEGRIPISNGKLRSHVLNDESRVNYTSACQEECLSQHTSKDDLDTNIRKLLNELECANRKCEIYRSNLLSVLKAVEDHKLQLSVKVENIKISMKDGI* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g3021 783 Coils Coil 726 753 - -
Pvu8g3021 783 MobiDBLite consensus disorder prediction 15 33 - -
Pvu8g3021 783 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 35 756 - -
Pvu8g3021 783 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 756 IPR031052 GO:0006355
Pvu8g3021 783 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Pvu8g3021 783 Pfam MULE transposase domain 288 381 IPR018289 -
Pvu8g3021 783 Pfam SWIM zinc finger 562 602 IPR007527 GO:0008270
Pvu8g3021 783 Pfam FAR1 DNA-binding domain 76 167 IPR004330 -
Pvu8g3021 783 SMART 26again6 579 606 IPR006564 GO:0008270
Pvu8g3021 783 MobiDBLite consensus disorder prediction 11 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g3021 Pvu-Chr8 59622755 59628252 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu8g3021 MULE 6.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g3021 - - gmx:100793442 1427.15