Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g3013 ATGAATCTGCTATGCCTTGCATTAACATTGATCCTCCTATTGCATGGATCAAGAGCAAGAGAAGAAGCTTCCAGACATGACGATAGTGTCGTCAAAATCGGTGCCATATTCACATTGAAAACTACAAACGGACAAGTATCCAAAATTGCCATCCAAGCTGCTGAAAAGGATGTAAATTCCGATCCTCGCATCCTGGGGGGACGTAAATTGTCCATAAACTTCCATGATTCCAACTTCAGTGGTTTTCTTGGCTTCATTGGGGCTCTGAAGTTCTTGATGACCGACACAGTAGCCATAATCGGTCCACAAACTTCAGGAATGGCTCATGTGCTTTCGCATCTCGCAAATGAGCTCCATGTTCCCCTGCTCTCCTTCACTGCTCTGGATCCCACCCTAACACCTCTCCAGTATCCTTATTTTGTCCAAACAGCACCCAACGATCAGTTCCAGATGTCAGCAATTGCAGACATGATTAGCTATTATGGTTGGAGAGAGGTGATAGCAATATTCAGTGATGATGATCCTAGTCGAAATGGGGTAACTATTTTGGGAGATAAACTTGCAGAGAGAAGCTGTAAGTTGTCCTACAAAGCAGCACTGCCTCCTGATCAAACTGCCACTCCAAGCTTTGTCACCACTCAGTTAGTGAAGATCAAGAGCATGGAGTCTCGAATAATCGTTCTACACACCTTCGCCAAAACTGGTCTCTTGGTTTTTGACATGGCTCAGAAACTAGGAATGATGACCAAAGGGTATGTCTGGATATCTACAACTTGGTTATCCACTGTTTTGGATTCAGCTTCTGCTCCACTACCTTCAAACATTTCTACCTCAGTTCTAGGAGTTCTTACCCTTCGCCCTCACACCCCCCAATCCATTAAAAAACAGGCTTTTATCTCAAGGTGGAAACACATAAGCAATGGCTCAGTTGGGTTAAATCCATACGGACTCTATGCGTATGATTCTGTGTGGATGATTGCTGAGGCACTGAACTTGTTTTTTGCTCAGAAGGGAACGGTTTCATTTTCTAACAACACAAATTTAAGCAGTACTGGGGAAGAGACTCTGGATCTGGGTGCTTTGAGTGTTTTTGATGGAGGGAAGCAACTTCTTGATACCATTTTGCGCATTAACATCACTGGATTAACTGGGCCTATTCACTTTGCTTCAGATAGATCTCCTCCACATCCATCATATGACATTATTAATGTAATTGCTTCAGGTTTTCGCAGCATTGGTTACTGGTCTAATTACTCTGGTCTGTCAGTGATAACTCCTGAGAAACTTCAGTTGAAGCCTGCAAATCGTTCAATTTCAAGCCAGAATCTGAAGCATGTGATATGGCCTGGAAATACTCTAGAAAAGCCTCGTGGATGGGTTTTCCCAAACAATGGGAGACAACTGAGAATTGGAGTTCCAAACAGGATCAGTTATAGAGCCATAGTCTCACAGATAAATGGCTCCAATGCAGTTCAAGGATATTGCATAGATATATTCCTAGCTGCCATAAAACTTCTTCCATATGCAGTTCAGTATGAGTTCGTTCTGTTTGGAGATGGAAAAAACAACCCAAGCTACTATGATCTTGTCAACATGATTACTTCTGATGTTTTCGATGCTGCTGTGGGTGACATTGCTATTGTCACTGACCGAACAAAGATTGCGGATTTTACTCAACCATATATAGAATCTGGGCTAGTTGTGGTTGCTCCGGTAAAAAAATTGAAGTCACATGCTTGGGCTTTCTTGCGACCATTTACTCCAATGATGTGGGGTGTTACTGCTTTTTTCTTCCTTTTTGTTGGAGCAGTGGTGTGGATTCTTGAACATAGAACGAACGATGAGTTTCGGGGGCTGCCAAAGGAACAGTTAGTTACAGTTCTTTGGTTTAGTCTCTCAACCATGTTCTTTGCGCACAGAGAAAACACAGTTAGTCCACTTGGTCGAATTGTGCTGATAATCTGGCTTTTTGTGGTTCTGATAATCAATTCAAGCTACACTGCAAGCTTGACATCAATTCTGACAGTGCAGCAGCTGTCTTCACCCATAACAGGAATTGATAGCTTGATGTCCAGCAGTGAACGTATAGGGTTCCAAGTAGGGTCGTTTGCTGCAAACTATCTAACTGAGCAACTCAACATCCCCAAACATAGACTTGTTCCTCTTGGCTCGCCAGAAGAATATGTCATTGCCCTTGAAAGAGGGATAGTTGCAGCTGTGGTGGATGAACGGCCATATGTAGAACTCTTCCTTTCAAACCACTGCAAATTCTCAATCAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCGAGGGACTCTCCTTTTGCAGTTGATATTGTCAACGGCGATTCTAACTTTATCTGA 2376 0.4301 MNLLCLALTLILLLHGSRAREEASRHDDSVVKIGAIFTLKTTNGQVSKIAIQAAEKDVNSDPRILGGRKLSINFHDSNFSGFLGFIGALKFLMTDTVAIIGPQTSGMAHVLSHLANELHVPLLSFTALDPTLTPLQYPYFVQTAPNDQFQMSAIADMISYYGWREVIAIFSDDDPSRNGVTILGDKLAERSCKLSYKAALPPDQTATPSFVTTQLVKIKSMESRIIVLHTFAKTGLLVFDMAQKLGMMTKGYVWISTTWLSTVLDSASAPLPSNISTSVLGVLTLRPHTPQSIKKQAFISRWKHISNGSVGLNPYGLYAYDSVWMIAEALNLFFAQKGTVSFSNNTNLSSTGEETLDLGALSVFDGGKQLLDTILRINITGLTGPIHFASDRSPPHPSYDIINVIASGFRSIGYWSNYSGLSVITPEKLQLKPANRSISSQNLKHVIWPGNTLEKPRGWVFPNNGRQLRIGVPNRISYRAIVSQINGSNAVQGYCIDIFLAAIKLLPYAVQYEFVLFGDGKNNPSYYDLVNMITSDVFDAAVGDIAIVTDRTKIADFTQPYIESGLVVVAPVKKLKSHAWAFLRPFTPMMWGVTAFFFLFVGAVVWILEHRTNDEFRGLPKEQLVTVLWFSLSTMFFAHRENTVSPLGRIVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDSLMSSSERIGFQVGSFAANYLTEQLNIPKHRLVPLGSPEEYVIALERGIVAAVVDERPYVELFLSNHCKFSIRGQEFTKSGWGFAFPRDSPFAVDIVNGDSNFI* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g3013 791 Gene3D - 453 578 - -
Pvu8g3013 791 Gene3D - 146 421 - -
Pvu8g3013 791 SUPERFAMILY Periplasmic binding protein-like I 28 460 IPR028082 -
Pvu8g3013 791 CDD GluR_Plant 466 783 - -
Pvu8g3013 791 Pfam Ligand-gated ion channel 590 693 IPR001320 GO:0015276|GO:0016020
Pvu8g3013 791 PANTHER GLUTAMATE RECEPTOR 3.6 26 783 - -
Pvu8g3013 791 SMART GluR_14 469 786 IPR001320 GO:0015276|GO:0016020
Pvu8g3013 791 Pfam Receptor family ligand binding region 49 405 IPR001828 -
Pvu8g3013 791 Gene3D - 579 714 - -
Pvu8g3013 791 PIRSF IGluLR_plant 1 786 IPR017103 -
Pvu8g3013 791 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 26 783 - -
Pvu8g3013 791 CDD PBP1_GABAb_receptor_plant 32 423 IPR044440 -
Pvu8g3013 791 SUPERFAMILY Periplasmic binding protein-like II 446 785 - -
Pvu8g3013 791 Gene3D - 49 396 - -
Pvu8g3013 791 Pfam Bacterial extracellular solute-binding proteins, family 3 486 784 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g3013 Pvu-Chr8 59473674 59477851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g3013 5 771 Ion Channels AT4G35290 63.979 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g3013 K05387 - gmx:100793969 1314.67