Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g3011 ATGGGAAACTGCTGGCCTTCTCAGCCTCACGGCGGCGTAACCCCAACAACCACCGGTAACCTTAGCACAGCCACGGCGGATACATCTCAGACCATCAGCAGCAGCACCACCAGCTTTACCACTAGCACAACCACAACTACTACTTCTGGAAGTGTGAACAGCTCCATGAATAGCAAGTTCTCGGTGGCAAGCGGTGACCAACCTTATCCAACTGGGCAGATCTTACCCGCCTCCAATTTGAGGATTTTCTCCTTTGCTGACTTGAAGGCTGCAACTAGGAATTTCAGGCCTGATTTAGTTCTTGGAGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAGAAGGGCAATTCCAAGAGTGGAACAGTCATTGCCGTCAAAAAACTCAACTCTGAAAGCTCACAAGGAATGGAGGAGTGGCGGTCCGAAATAAACTTTCTAGGACGCCTTTCCCATCCTAATCTTGTTAAGCTATTGGGCTACTGTTTGGAGGAAACAGAGCTTCTTCTTGTCTATGAATTTATGCGAAAAGGAAGTTTGGAAAACCATCTATTTGGAAGGGGTTCTGCCGTTCAACCACTTCCCTGGGATATCAGGCTTAAGATAGCAATTGGCGCAGCTCGTGGGCTTGCTTTCCTTCATACATCCCAGAAAGTAATTTACAGAGACTTCAAGGCCTCAAATATATTGCTTGATGGGTCCTATAACGCAAAGATATCAGATTTTGGCTTGGCAAAGTTGGGTCCTTCAGCTAGTCAATCTCATGTCACAACAAGGGTGATGGGCACATTCGGTTATGCAGCTCCTGAATATGTGGCCACAGGGCATCTATATGTGAAGAGTGATGTATATGGGTTTGGAGTTGTTTTGGTGGAAATACTAACAGGGCTACGAGCACTTGATCCCAACCGTCCAAGTGGGCAACATAATCTAACAGACTGGGTGAAACCATACCTGCATGACAGAAGAAAGTTGAAGGGCGTTATGGATTCTCGATTGGAAGGAAAGTTTCCATCAAAAGCTGCATTTCGTATAGCTCAGCTTGCTTTGAAATGTCTTGCAACTGAGCCCAAACAGCGACCATCAATGAAGGAGGTATTGGAGAGTATGGAGCGAATTCAAGCTGCCAATGAGAAACCTGTGGAGCCTAAATCACGATCTACTAATACTCGTCAAGCCCACCAAGCTGTGCACCATCGTTCTCCGCTTAAAGACAGTAGTTACTTCACCAAGCTGCTGAAGTAA 1251 0.4636 MGNCWPSQPHGGVTPTTTGNLSTATADTSQTISSSTTSFTTSTTTTTTSGSVNSSMNSKFSVASGDQPYPTGQILPASNLRIFSFADLKAATRNFRPDLVLGEGGFGKVFKGWLEEKGNSKSGTVIAVKKLNSESSQGMEEWRSEINFLGRLSHPNLVKLLGYCLEETELLLVYEFMRKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSQKVIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHVTTRVMGTFGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDPNRPSGQHNLTDWVKPYLHDRRKLKGVMDSRLEGKFPSKAAFRIAQLALKCLATEPKQRPSMKEVLESMERIQAANEKPVEPKSRSTNTRQAHQAVHHRSPLKDSSYFTKLLK* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g3011 416 MobiDBLite consensus disorder prediction 383 398 - -
Pvu8g3011 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Pvu8g3011 416 PANTHER BNAA09G08980D PROTEIN 20 403 - -
Pvu8g3011 416 MobiDBLite consensus disorder prediction 1 55 - -
Pvu8g3011 416 PANTHER OS01G0588500 PROTEIN-RELATED 20 403 - -
Pvu8g3011 416 SUPERFAMILY Protein kinase-like (PK-like) 70 370 IPR011009 -
Pvu8g3011 416 MobiDBLite consensus disorder prediction 9 55 - -
Pvu8g3011 416 Gene3D Transferase(Phosphotransferase) domain 1 177 401 - -
Pvu8g3011 416 ProSiteProfiles Protein kinase domain profile. 95 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g3011 416 CDD STKc_IRAK 101 375 - -
Pvu8g3011 416 MobiDBLite consensus disorder prediction 377 416 - -
Pvu8g3011 416 Pfam Protein tyrosine and serine/threonine kinase 100 371 IPR001245 GO:0004672|GO:0006468
Pvu8g3011 416 ProSitePatterns Protein kinases ATP-binding region signature. 101 130 IPR017441 GO:0005524
Pvu8g3011 416 Gene3D Phosphorylase Kinase; domain 1 79 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g3011 Pvu-Chr8 59456714 59459935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g3011 76 380 Receptor kinase-like Gene Family AT4G02010 51.456 1.27e-101 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu8g3011 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g3011 - - vun:114194495 702.975