Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2987 ATGGCTGCACAAGCTCTGCTACCATCTTCATCTCTTGTCTTCTCATCTGAGTCTGCAAGACAGAGTCTTGGACCAAGATCACTCCAATCTCCCATTGGGTTCTCCCGAAAACAATCCTTCATTGTCAAGGCAGCTTCTACTCCCCCTGTCAAGCAAGGAGCAGACAGACCCTTATGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGATGGCAGTCTTCCTGGTGACTATGGATTTGACCCTCTTGGGCTTTCAGACCCTGAAGGAACAGGAGGGTTCATTGAGCCCAAATGGCTAGCATATGGTGAAGTCATCAATGGTCGTTTTGCAATGTTGGGTGCAGTAGGTTCCATAGCACCTGAAATTCTTGGCAAGGCTGGTCTGATCCCTGAGGAAACAGCACTGCCATGGTTCAGAACCGGTGTGGTCCCACCTGCAGGAACCTACAACTACTGGGCAGACTCCTACACCCTCTTTGTGTTTGAGATGGCACTGATGGGATTTGCAGAGCACAGAAGATTCCAAGATTGGGCAAAACCAGGCTCAATGGGGAAACAGTACTTCTTAGGACTAGAGAAGGGTCTTGGAGGTTCTGGTGAGCCAGCATACCCAGGAGGACCTCTCTTCAACCCTCTTGGTTTTGGGAAAGATGAGAAATCCTTGAAGGATTTGAAGCTGAAGGAGGTGAAGAATGGAAGGTTGGCTATGTTGGCAATTTTGGGTTACTTTATTCAAGCTCTTGTGACAGGTGTTGGGCCATACCAAAACCTCTTAGATCATCTTGCAGACCCTGTCAACAACAATGTCTTGACCAGTCTCAAGTTCCACTAA 831 0.4777 MAAQALLPSSSLVFSSESARQSLGPRSLQSPIGFSRKQSFIVKAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAVGSIAPEILGKAGLIPEETALPWFRTGVVPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2987 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Pvu8g2987 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Pvu8g2987 276 Pfam Chlorophyll A-B binding protein 67 246 IPR022796 -
Pvu8g2987 276 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 8, CHLOROPLASTIC 1 275 - -
Pvu8g2987 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 275 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2987 Pvu-Chr8 59318664 59320347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2987 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 84.420 6.88e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2987 K08909 - gmx:100784090 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2987 8 59318664 59320347 Pvu8g2987 8 59318664 59320347 ECH