Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2985 ATGGCAACCATTACTCCACAAAAGGGTAGCCAAAGTGAGGTGGGTGTGAGCAACACAGACCCCCTCAACTGGGGTAATGCAGTGGAGTCACTGAAGGGTAGCCACTTGGAGGAAGTAAAAGGGATGGTGGCGGAGTACCGGGAGGCAGTGATCCATGTGGGGGGAGGGGAGACACTTACTGTATCAAAGGTGGCTGCTGTTGCAAACCAGTACTTGCAGGCTAAGGTTGACCTCTCTGAGTCTGCAAGAGAAGGCGTTGACTCCAGCTGCAAGTGGATCGTGGATAACATCGACAAAGGCATTCCCATTTATGGTGTCACCACTGGTTTTGGTGCAAACTCCAACAGGCAAACTCAAGAAGGCCTTGCTCTTCAGAAGGAAATGGTTAGGTTTTTAAACTGCGCCATATTTGGCTACCAAACGGAGTTATCTCATACACTGCCAAAATCAGCAACCAGAGCAGCAATGCTTGTGAGGGTTAATACCCTTCTTCAAGGGTATTCAGGTATTAGATTTGAAATCCTAGAAGCTATCACCAAACTCCTCAACCACAATGTCACCCCCATCTTGCCCTTACGTGGTACAATCACTGCTTCTGGTGATCTGATTCCTCTGTCCTACATTGCTGCATTGCTAATTGGTAGAAGAAACAGTAAAGCTGTTGGACCCTCTGGAGAGTCCCTCAATGCTAAGGAAGCTTTCCACTTAGCAGGTGTAGATGGTGGGTTCTTTGAGTTGAAGCCTAAGGAAGGTCTTGCCCTTGTAAATGGCACAGCCGTTGGGTCTGGTGTAGCTTCTATGGTGCTTTTTGAGGCAAACATATTAGCTTTATTGGCAGAAGTTCTATCAGCAGTTTTTGCTGAAGTGATGCAGGGAAAGCCAGAGTTCACAGATCACCTTATACATAAGCTGAAGTACCATCCTGGTCAAATTGAAGCAGCTGCTATTATGGAACATATTCTAGATGGAAGCTCTTATGTCAAGAATGCTAAACTGCAACAGCCAGATCCATTGCAGAAGCCTAGAAAAGATCGTTATGCTCTTGTAACTTCTCCTCAATGGCTTGGTCCACAGATTGAAATCATCAGGTTTTCGACCAAATCAATTGAAAGGGAAATAAACTCAGTAAATGACAATCCCTTGATTGATGTCACAAGGAACAAGGCTGTGAGTGGTGGTAATTTCCAAGGCACCCCAATTGGAGTTTCCATGGATAATGCACGTTTAGCTGTTGCTTCAATTGGCAAACTCATCTTTGCACAATTTACTGAACTAGCCAATGATTTGTATAATAATGGGCTACCATCAAACCTCTCTGTTGGTAGAAATCCAAGTCTGGATTATGGGTTCAAGGCATCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAGTATCTAGCAAATCCAGTAACCAGCCATGTGCAAAGTACTGAGCAGCACAACCAAGATGTGAATTCTTTGGGCTTAATTTCGGCTTTGAAAACTGTGGAAGCCATAGAGATATTAAAGCTTATGTCTTCCACTTATCTGGTTGCACTCTGCCAAGCTATTGATTTGAGGCATTTGGAGGAAATTTTCAAGAACACTGTCAAGAATACTGTGAGCAGAGTTGCACTGAAAACATTAACTACTGAAGACAAAGAAGAAACTAACCCATTTCGATTCAGTGAGGAAGAACTGCTTAAAGTGGTGGATAGAGAATATGTATTTTCATACATTGATGATCCCTTAAATGTAAGGTACCCATTGATGCCAAAACTAAAGCAGGTACTTTATGAGCAAGCACATACCAGTGTCATTAATGACAAGAATGTGAGTTTGTTGGTTTTTGAGAAGATTGGAGCTTTTGAGGATGAGTTGAAGTCTCTCTTGCCAAAGGAAGTAGAAAGTGCACGGGTAGCTTATGAGAATGGTAATCCAGCAACTCCAAACAGAATCAAGGAGTGCAGGTCATATCCACTGTACAAATTTGTGAGGGAGGAGTTAGGGATACGGTTGCTCACCGGCGAAAAAGCTCTCTCTCCAGATGAGGAATTTGAAAAGGTTTATACAGCCATGTGTCAAGCAAAGATAATTGATCCAATTCTGGAATGTCTAGAAGATTGGAACGGGGTTCCCATCCCAATATAG 2133 0.4337 MATITPQKGSQSEVGVSNTDPLNWGNAVESLKGSHLEEVKGMVAEYREAVIHVGGGETLTVSKVAAVANQYLQAKVDLSESAREGVDSSCKWIVDNIDKGIPIYGVTTGFGANSNRQTQEGLALQKEMVRFLNCAIFGYQTELSHTLPKSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTITASGDLIPLSYIAALLIGRRNSKAVGPSGESLNAKEAFHLAGVDGGFFELKPKEGLALVNGTAVGSGVASMVLFEANILALLAEVLSAVFAEVMQGKPEFTDHLIHKLKYHPGQIEAAAIMEHILDGSSYVKNAKLQQPDPLQKPRKDRYALVTSPQWLGPQIEIIRFSTKSIEREINSVNDNPLIDVTRNKAVSGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELANDLYNNGLPSNLSVGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSTEQHNQDVNSLGLISALKTVEAIEILKLMSSTYLVALCQAIDLRHLEEIFKNTVKNTVSRVALKTLTTEDKEETNPFRFSEEELLKVVDREYVFSYIDDPLNVRYPLMPKLKQVLYEQAHTSVINDKNVSLLVFEKIGAFEDELKSLLPKEVESARVAYENGNPATPNRIKECRSYPLYKFVREELGIRLLTGEKALSPDEEFEKVYTAMCQAKIIDPILECLEDWNGVPIPI* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2985 710 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 194 210 IPR022313 GO:0016841
Pvu8g2985 710 Gene3D Fumarase/aspartase (Central domain) 259 705 - -
Pvu8g2985 710 Gene3D - 11 258 IPR024083 -
Pvu8g2985 710 Gene3D - 524 645 IPR023144 -
Pvu8g2985 710 PANTHER HISTIDINE AMMONIA-LYASE 1 710 IPR001106 -
Pvu8g2985 710 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 20 701 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pvu8g2985 710 MobiDBLite consensus disorder prediction 1 21 - -
Pvu8g2985 710 PANTHER PHENYLALANINE AMMONIA-LYASE 1 710 - -
Pvu8g2985 710 SUPERFAMILY L-aspartase-like 20 710 IPR008948 GO:0003824
Pvu8g2985 710 CDD PAL-HAL 57 521 IPR001106 -
Pvu8g2985 710 Pfam Aromatic amino acid lyase 59 524 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2985 Pvu-Chr8 59310665 59313444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2985 20 710 Monolignol Biosynthesis Gene Families AT2G37040 71.676 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2985 K10775 - gmx:100787872 1219.91