Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2951 ATGGTTTCTTCAGACAAAAGTGTAGATCAAAATACCCCTTCTGATAAATTGCAGCATAGAGCGAGTTCTGATAGTGATGTTACATTGTCACAAGGTCATGATACTAAAAATGTTCTGTCCAAACCAGAGGGAGCAACAAGTACTCCTTCTGTTGTAGCTAAAAATGAAGAGGGGAAGGACTCTGATGCTACTGCTTGTGCCCTGGAATCAGATCAAGAAGGAAGCACGTGCTCCTTACCACTTGAGAAACATTTGCAGAGCCCTGATACTCTTTTGAATGAATTGCCTCCATTGCAATCCAGTCTGGAAAGTCCCTCTGTAATACGTGAGAAGGTATCTAAAGATGGCTATAACTGGCGAAAATATGGTCAGAAACATGTCAAGGGGAATGAATTTATACGCAGCTATTACAAGTGTACATATCCAAATTGCCAGGCAAAAAAGCAGTTGCAGCAGTCTAATAATGGGAACATCACAGATTGTGTTTCTATCGGACAGCATAATCATCCTAGGCCTCAATTGAACTCCACAGTATCAGTTGAATGTGTTTTGCCGGTTGTGGAACAAGCAGCACGCAAGCCCTTGTTAGCCAATGTGAAAGACAAAACATCCGTTGAGCAAGGATGCATTCCTCAACAGATCAAGCCTTTACAGTCCCTTCCACCTACACAAGTGTCCCCAGTCAATGAGTTGAAAGCTGCACATTCACAATTGTCTAAGGCAAGGAATCAGGTTCATGACAACGAGGATCCTGAGTCAAAGCGACTGAAGAAAGACAACAGTAATGCGGATACCACTGGAGTTAACATGTCAACTCGTGAATCTCGTATTGTTGTTCAGACTTCAAGTGAGGTTGATTTAGTAAATGACGGGTATCGCTGGCGCAAATATGGGCAGAAGCTTGTTAAAGGGAATGCAAACCCAAGAAGTTACTACCGATGCTCAAATCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAATTGTAATAACTACCTATGAGGGACAACATGATCATGAACTTCCCCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATATGAACTCAACAACCATGAATGGCAAGGCAGGAACCAAATCTGAAGATACTGTTAATAGAGGGGAACAAAGTGGCTTGGACTCACCAAGCAAATTAACAGAGAAACTAAATGGCAAGTCAACTACTAAGTCAAAGGTCGGCGATATGGTTGACTTTGGCGGGTTCAGCCTTTCTAATGAGGGTCCTGAAATTAAATTAAAGGAGCAACAACAAAAAGATAACTTAGGTACTAAAGACGATTCTGTCAGCAATGATGTTGTATGCCATTCTAGTTCTGAAGTTCCATGTAGATCAAATGAACAGCTGAAAGGGGAGGTAAAACCTTTATCAGAAGGAACTAAGGATTGCCTTAGCAAGGTTGCCATTCATGATACCCCCAGTACAGAAAGCGAATTTAATAAGCAATCAGCACCTGATGCAGAACCGGTCCAAAGCTAA 1518 0.4216 MVSSDKSVDQNTPSDKLQHRASSDSDVTLSQGHDTKNVLSKPEGATSTPSVVAKNEEGKDSDATACALESDQEGSTCSLPLEKHLQSPDTLLNELPPLQSSLESPSVIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTYPNCQAKKQLQQSNNGNITDCVSIGQHNHPRPQLNSTVSVECVLPVVEQAARKPLLANVKDKTSVEQGCIPQQIKPLQSLPPTQVSPVNELKAAHSQLSKARNQVHDNEDPESKRLKKDNSNADTTGVNMSTRESRIVVQTSSEVDLVNDGYRWRKYGQKLVKGNANPRSYYRCSNPGCPVKKHVERASHDSKIVITTYEGQHDHELPPGRTVTHNAATNMNSTTMNGKAGTKSEDTVNRGEQSGLDSPSKLTEKLNGKSTTKSKVGDMVDFGGFSLSNEGPEIKLKEQQQKDNLGTKDDSVSNDVVCHSSSEVPCRSNEQLKGEVKPLSEGTKDCLSKVAIHDTPSTESEFNKQSAPDAEPVQS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2951 505 SUPERFAMILY WRKY DNA-binding domain 109 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 455 - -
Pvu8g2951 505 MobiDBLite consensus disorder prediction 1 62 - -
Pvu8g2951 505 MobiDBLite consensus disorder prediction 361 404 - -
Pvu8g2951 505 MobiDBLite consensus disorder prediction 361 505 - -
Pvu8g2951 505 ProSiteProfiles WRKY domain profile. 108 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 Pfam WRKY DNA -binding domain 114 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 Pfam WRKY DNA -binding domain 289 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 MobiDBLite consensus disorder prediction 242 261 - -
Pvu8g2951 505 MobiDBLite consensus disorder prediction 483 505 - -
Pvu8g2951 505 MobiDBLite consensus disorder prediction 440 458 - -
Pvu8g2951 505 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 455 IPR044810 GO:0003700
Pvu8g2951 505 Gene3D WRKY domain 102 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 MobiDBLite consensus disorder prediction 232 268 - -
Pvu8g2951 505 MobiDBLite consensus disorder prediction 425 439 - -
Pvu8g2951 505 Gene3D WRKY domain 275 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 MobiDBLite consensus disorder prediction 1 54 - -
Pvu8g2951 505 SMART WRKY_cls 113 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 SMART WRKY_cls 288 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 SUPERFAMILY WRKY DNA-binding domain 280 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g2951 505 ProSiteProfiles WRKY domain profile. 283 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2951 Pvu-Chr8 59105885 59109637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2951 98 371 WRKY Transcription Factor Family AT2G04880 50.714 4.68e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g2951 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2951 K18834 - gmx:100781219 820.846