Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2950 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGCATGTACTATCAACCATTACAACAAATTGAAGCCTACTGTTTGCCACGGTATCGGAGTCTAAATCAACAGCTATACTACCATGATGGAGGCCATGGAACTCAGTTTTCAACTCCAAGTTCTTCTGAACTTTACTGTACATTGGAGTCATCTTCTGTAGCTGGTAGTTTCACCCTTTACAACTCCCCTTCAACTGTTAACTTCTCACCGAATGGTAGCCCCATATCTCAGCAAGACTCTCACTCATATCCACCTGACCAGTATCATTCCCCTGAGAATACCTACGGCTCTCCAATGAGTGGCTCCTGCATAACCGATGATTTAAGCAACTTCAAACACAAACTGAGAGAGTTGGAAAGTATAATGCTTGGCCCTGACTCTGATAATCTTGATAGTTATGACAGTGCCATAAGCAATGGAAACAACTTTGCTTCACCTGAGATGGACAGTTGGAGACAAACAATGGTGGCAATTTCTAGCAAAAACCTGAAGCATATCCTTGTTGCATGTGCCAAAGCCATTGCAGACAATGATTTACTCATGGCACAGTGGCTGATGGATGAATTAAGGCAGATGGTGTCAGTTTCTGGCGACCCAATTCAACGATTGGGAGCATACATGCTGGAAGGACTAGTTGCACGATTGGCTGCTTCAGGGAGTTCAATATACAAAGCTTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCCTACATGCACATACTATATGAGGTTTGCCCCTACTTCAAATTTGGATACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGACAGGGTGCACATAGTTGATTTCCAAATTGGTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATTCGGATTACAGGTATTGATGACTCACAATCAGCTTATGCCCGGGGTGGTGGACTGCACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCGTTTGAATTTCATTCTGCAGCTATCTCTGGTTGTGATGTTCAAGTACATAACCTTGGAGTTCGACCGGGGGAAGCTCTGGCTGTGAATTTTGCCTTCATGCTACATCACATGCCAGATGAAAGTGTGAGTACTCAGAATCACAGGGACAGGCTGTTGAGGTTGGTTAGGAGCCTATCTCCAAAGGTGGTGACACTTGTAGAGCAGGAATCTAACACAAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGATCATAAAGAGAGAATCAATGTGGAGCAGCATTGTTTGGCAAGAGATTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGGCATGAGGTGCTTGGGAAGTGGAGGTCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCACTGGTGAATGGTACCATTAAGAAATTGCTTGAGAACTACAGTAATAGATATAGACTTGAAGAGAGAGATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAAATGA 1632 0.4406 MQASEQHRSSSMYYQPLQQIEAYCLPRYRSLNQQLYYHDGGHGTQFSTPSSSELYCTLESSSVAGSFTLYNSPSTVNFSPNGSPISQQDSHSYPPDQYHSPENTYGSPMSGSCITDDLSNFKHKLRELESIMLGPDSDNLDSYDSAISNGNNFASPEMDSWRQTMVAISSKNLKHILVACAKAIADNDLLMAQWLMDELRQMVSVSGDPIQRLGAYMLEGLVARLAASGSSIYKALRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIVDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSQSAYARGGGLHIVGRRLSKLAEHFKVPFEFHSAAISGCDVQVHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPRDHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSNRYRLEERDGALYLGWMNRDLVASCAWK* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2950 543 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 543 - -
Pvu8g2950 543 Pfam GRAS domain family 173 543 IPR005202 -
Pvu8g2950 543 MobiDBLite consensus disorder prediction 79 106 - -
Pvu8g2950 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Pvu8g2950 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2950 Pvu-Chr8 59102838 59104793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2950 12 543 GRAS Transcription Factor Family AT5G48150 66.481 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu8g2950 GRAS 8.4e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2950 - - gmx:100808300 1041.95