Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2940 ATGTCCCAAGAAAGCACGTCCTCAAGTGGTGGTGATTGTGGTGCCACCATTGAACTTGGTGCTACCTTACTTGGTTCTACTACCAAAGGGAAGTACACAAGGATATGGCGCAAGAGTTTATACATAAGGTGGTTCCTCATCTCCGCCAAGAAGCCAGCAACTTCCAGTGGCAACCATGAGTCTCCACCATCACCAGATTCACTACTTCCTTCAATACCGTTCCCTTCATTCTCTCCTGCTAGAACCTCCTCTTCCAGATCCTATGTTGCAGTTGATATAGAAGAGATTAGCAGTGATGCTGCTGGAATTGTGAGGGACCAGGCCTTGAATTCTCTTCCTGGTCTGGGTGAAGTTGACTTCGGTTCAACTCTCCTTGGTGGTCAACTTCAATACGCACAGGAGCACCATGATTTTGAGGGGGGGAAAACCAGCATACCGTTACTAGACTTGTTCAACTCTTTGTTGAACAGCTACAAATGCTACCGTTGCACAATTTTGATGCTGTTGGTCTCAGCTGGGTTGTCATTCGCCATAGAGTTCAAGCAGGAGGGACCTAAACATGGTTGGCATGATGGTGTTGCTATACTATTTGCTATTCTCCTGCTGGTTCTGGGAAAATCAGTGGCAAACTTTTTGTGTGAGAGGAAAAAGTTGAAATTGGCGGGGAGAAAGCAGGAGTTGGAATGCAGAGTGAAACGAGGTGAAGAGTTCAAAGTGGTTCCCATATCTGATATTCAGGTGGGAGAGGCAGTGTTCCTGTGGCCAGGAGATGTGGTTCCAGCAGATGGTGAGCTTGCAAGTGATGGCATCCTTGTGCTGGCTGAGCTTCAGGAAATCAAAAGCAAGGAGCAGAATCCGTCTCTTGTAACTGGTTCAAAGGTGATTGGGGGTCAGGGATGGATGTTGGTAACATCAGTTGGAACCAAAACCAATTTGGCTAATATAGGTATCTGTAATTCTGAAAGGAGGGGTTTGTTGGAAAGGAAAATTGAGAAGCCAATTTCTTACATTGACATGGCTGCTCTTTCTGTCTCTGTACTGGTTGCATTTGTGGTGTTAGTTCGCCTGATTTATGGAAAAGATAGGAGCAATGCAGGGTTACCAGAAATGAAAGGGAAGGTCTCAATTGGCATTTTGATGAAAGTCCTTGAGAGAATTTTTCTGAGACCCCAGGGAAGGGTTTCCATTTTATCAGGTCTTGTTACTGTTGCAATACTTTGCGTGCAGCATGGAATGCCACTTGTGGTTACAATTTCTCTAAAGTACCAGATTGATAAGGAACTAAGAAACCAAGATGCAGTTCTTAATGATTTGTCTGCTTGTACTACAATGGGGTTGGTAACTGTCATCTGCATTGATGTGTCAGGGGAGCTAATATCCAAGCAAATGGAAGTTAGCAGAATATCTGTGGGAGAGGAAGATATCATGAGCATGGTTGAGGGAGCAGAAATAGAAAAATTACCAGTGCTTGACATGCTTAAAGTAGGGGTTGGTGTATCAGTCCTTGCACCAGAGATTTATCTTTCCCCTTTGTTCAATCCACTTGTTTCTTGGGCAGAAACAACATGGGAAATGAGCATGAGATCTTTCACCGAAGAAAAATTTGACATTCTTAAGCACAGCAAGTTGAATTCTGGCGGAGAAGGCAGTGGAGTTTTGGTGAGAAAAGATGGGGACAGTGAAGTTCTGCACTTGCACTGGAGTGGAGCTGCATCAGCAATATTGGAGATGTGTTCACAGTACCATGACAGTGAAGGGAATTGCCACGCCATGGAAAATCAGAGAATCAAATTTCTTCAGGTGATTAAAGACATGGAGGATAATGGACTCAGGCCAATGGCTTTTGCTTATAAACAAACAGATGGTGAAGAACTTGAGCAGGAAGAACTGATCTTATCTGGAGTGATAGGCCTGAAAGACACCAGCCAAGAATCCATAAAACCAGCTTTGGAAAGTTTGAGAAATGCTGAAAATGTGCAGATCAAACTGGTTTCGGAGGATGGCATTGAGAAATTGGAAGGCATTGCTTGTGAGCTAGGACTAGAACATGGTGTTGTGCTTGAAGGCAAACAACTTCAAGATTTGAATGAGGAAGCTAGATTAGTCGAAGTGGATCGGGCCCATGTGATGGCAAGATTCCTTCCTGAGGACAAACTTCTGATGATACAGTGCTTGCAAGAGAAAGGTAAGGTGGTTGCATTCATTGGAACAAGGTTGATGAATGATCATACCTCAGTTCTAAAAGTAGCTGATGTGGGGATAGTGCTTGATTCTCTAAGCACAAGAGTGGATAGAGAAAGTTGTGACATATCTATCAGATGCTTCAGTTCATTGGAACCCATTGTGATAGCTGGAAGAGGTAAATATCTCAACATTCAGAAGTTCATTCAACTTCAGCTGACATGTATCATATCAGGATCAGTCATAACCTTGCTTACAACATGTGCTGGAGATTCCCCTCTTGCACCATTCCAGTTGATTTGGGCGAATGTTTTGGTGTGCATTCTGGGTGGCCTAATGATGGTAATGACTTTAACCAACCAGGAACAGCTTTCTAAACAACCATCTGATCACAGGAACCAAAATATCATGGCCAAAGAAATCTGGAAAAGCATTGCCATTCAGATCGTCAATGTGCTCAACACCATGCAGTTGTTGAGAAAGGAAGTTCTTGTTCAGAGCTTCTATTTCTTGGGAGCCTTAGTTATATGTTTTCTGATGCAAGTGGTGGTGATTGAGTATGCTAAAGGCCTAGCAGATTGCATGCAGTTGAATGCTACAAAATGGGGTATCTGTGTCATGATTGGTGGTCTTGCATGGGTATTTGACTGGAGCATGAAGAATATTCTTCCAGTTCTTCTCAATCCCAACACCAATTATTCTTCACTTTCAATTATTACTTCACCTTCTTTCTTTCTTTCTCAAACTTTTTCATTTGTGATGCTACTTTTGTTCCCTATTGGACTATTTTTTAGTCAAATAGGCATGAACATGACACTTCGTTAG 3006 0.4291 MSQESTSSSGGDCGATIELGATLLGSTTKGKYTRIWRKSLYIRWFLISAKKPATSSGNHESPPSPDSLLPSIPFPSFSPARTSSSRSYVAVDIEEISSDAAGIVRDQALNSLPGLGEVDFGSTLLGGQLQYAQEHHDFEGGKTSIPLLDLFNSLLNSYKCYRCTILMLLVSAGLSFAIEFKQEGPKHGWHDGVAILFAILLLVLGKSVANFLCERKKLKLAGRKQELECRVKRGEEFKVVPISDIQVGEAVFLWPGDVVPADGELASDGILVLAELQEIKSKEQNPSLVTGSKVIGGQGWMLVTSVGTKTNLANIGICNSERRGLLERKIEKPISYIDMAALSVSVLVAFVVLVRLIYGKDRSNAGLPEMKGKVSIGILMKVLERIFLRPQGRVSILSGLVTVAILCVQHGMPLVVTISLKYQIDKELRNQDAVLNDLSACTTMGLVTVICIDVSGELISKQMEVSRISVGEEDIMSMVEGAEIEKLPVLDMLKVGVGVSVLAPEIYLSPLFNPLVSWAETTWEMSMRSFTEEKFDILKHSKLNSGGEGSGVLVRKDGDSEVLHLHWSGAASAILEMCSQYHDSEGNCHAMENQRIKFLQVIKDMEDNGLRPMAFAYKQTDGEELEQEELILSGVIGLKDTSQESIKPALESLRNAENVQIKLVSEDGIEKLEGIACELGLEHGVVLEGKQLQDLNEEARLVEVDRAHVMARFLPEDKLLMIQCLQEKGKVVAFIGTRLMNDHTSVLKVADVGIVLDSLSTRVDRESCDISIRCFSSLEPIVIAGRGKYLNIQKFIQLQLTCIISGSVITLLTTCAGDSPLAPFQLIWANVLVCILGGLMMVMTLTNQEQLSKQPSDHRNQNIMAKEIWKSIAIQIVNVLNTMQLLRKEVLVQSFYFLGALVICFLMQVVVIEYAKGLADCMQLNATKWGICVMIGGLAWVFDWSMKNILPVLLNPNTNYSSLSIITSPSFFLSQTFSFVMLLLFPIGLFFSQIGMNMTLR* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2940 1001 SUPERFAMILY Calcium ATPase, transmembrane domain M 164 950 IPR023298 -
Pvu8g2940 1001 Gene3D - 554 641 IPR023299 GO:0000166
Pvu8g2940 1001 SUPERFAMILY HAD-like 449 837 IPR036412 -
Pvu8g2940 1001 Gene3D - 448 460 IPR023214 -
Pvu8g2940 1001 Gene3D - 781 878 - -
Pvu8g2940 1001 Pfam E1-E2 ATPase 227 420 - -
Pvu8g2940 1001 Gene3D - 213 317 - -
Pvu8g2940 1001 PANTHER CATION TRANSPORTING ATPASE 83 876 - -
Pvu8g2940 1001 PANTHER CATION TRANSPORTING ATPASE 875 964 - -
Pvu8g2940 1001 PANTHER CATION-TRANSPORTING ATPASE PLANT 83 876 - -
Pvu8g2940 1001 PANTHER CATION-TRANSPORTING ATPASE PLANT 875 964 - -
Pvu8g2940 1001 Gene3D - 461 475 IPR023299 GO:0000166
Pvu8g2940 1001 Gene3D - 376 447 - -
Pvu8g2940 1001 SUPERFAMILY Calcium ATPase, transduction domain A 228 315 IPR008250 -
Pvu8g2940 1001 Gene3D - 642 780 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2940 Pvu-Chr8 59030635 59034310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2940 158 960 Primary Pumps ATPases AT3G63380 31.321 1.91e-104 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2940 K01537 - gmx:102661547 1185.24