Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2933 ATGGAAGCAAACAAGGAGGAAGCACTTAAAGCGGTAGAGATTGCTGAAAAGCGATTTGCTGTGAGGGACTTTGCAGGTGCAAAAAACTATGCTGTAAAGGCTAAAACACTTTGTCCTGGATTGGAGGGTATATCTCAAATGGTGGCCACATTTGAAGTTTACATTGCTTCTGAGGTCAAACATAATGGTGAGCTAGATTACTATTCGATTCTTGGATTAAAACCTTTTGCAGATAAGGAGGCTGTGAAGAAACAATACAAGAAGTTGGCGGTGTTGCTTCATCCAGATAAGAACAAGTGTGTGGGAGCTGATGAGGCATTTAAGCTTGTTTCCGAGGCTTGGACTTGGCTATCAGATAGTGCTATGCGTAGTTCTTATGATCTCAAGAGAAATGCGCAGTTGGCTGGGACTAACCAGATGAATTTGTCTCCTGCTACAGGGGCTGCAGGTTATAACAAATGTTCCAATTTGTCGAGCCCTCGTGGTGGGCTTGACACCTTTTGGACTATCTGCACCTCTTGTAAGGTTCAGTACGAGTATCTGCGCAAGTACGTGAATAAAAAACTATCTTGCAAGAACTGCCGTGGAACTTTTGTTGCTGTTGAAACTGGGGCGGCCCCAGCAAACGGTTCTTTTCCATATTGTCCTTGGTCATATGTGCCAGGAAATGGGTATGGAAGTCACTCATTTGATGGTGTCTCATATGTTCCACCTAGTGCCCCCTATTTCAATGGGAATGGAGTTGCAGGATACAATTCTGGACATGGATATGATTACATTCAGAATGTTTCATTTTGGGGCTCTGCTGGAGTTGTCAATCAAAATGGATCAACTACCTTACCTGCTGATTCTGTTAATCGGGCAAATGGAAATGTGAAGAGGGGAAGACCAAAAATCAAAAGGCATCATCATGTAGCAGATACTATGGTGAATATAAATTCAGATGTATCATTCTCCTGTAGTGAACCACAGGAAGATAAACTAAGTAGACCTGACAAGAAACAGAAAGTTGCTGTGGGAGCCACTTTCAGAAATGGCTACGATGAAAAGGGTTCAAAATGTGCTCTAGAATCAATAGTGTCTAACGGAAATGATAGCACCGGACATGGCCAAAAGCCTTCCTGCACAGTTGAAGTTCAAACCAAACATTGTTCCATGGCACCGGCATTCGATGCAAGAAAATTATTGATTGAGAAAGCCAGGACTGAAATCAGGAAGAAACTGGAGGAGATGAAGCTGTCATCTGAAGCAGCAGCTGCAGCTTTGAAAGAGAGAGAAAAATCTGAAGCTCAAGTTGGTCTAGTTAAAAGAGAGACATGTAGAAAAACATCCCTGAATGTTTCCGGTCTACAGCTAGAGAATGGGAAAGCTGGTCCAATCTCAATTACTGTCCCAGATTCTGACTTCCATGACTTTGATAAAGATAGGTCAGAGGAATGCTTCAGGCCAAAGCAGATATGGGCCCTGTATGATGAGGAAGATGGAATGCCACGGTTGTATTGTATGATCCGCGAGGTCGTGGCTATCAACCCATTTAAGATTCTCATCAGTTACCTGAGTTCCAAAACTGATAGTGAGTTTGGTTCAGTAAACTGGCTGGATTCAGGTTTTACTAAATCTTGTGGAAATTTCAGGGCTTTTAATAACGATGTTGTTGATCATGTTAACATATTTTCTCATGTTCTAAGTCAGGAGAAGGCTGGTCGGGGGGGTTGTGTCCGCATATATCCCAGAAGTGGAGATATCTGGGCTGTGTATCGAAATTGGTCACAGGATTGGAACCGATCTACGCCGGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTTAGTCCCCTTGTTAAGTTGGCTGGATATAAAACAGTATATCAGAGTAATACTGACAAGAGTGCCATAAAATGGATACCCAAAAGAGAGATGTTGCGGTTTTCACATCAAGTGCCTTCTTGGTTGCTGAAGAGGGAGGCTGAGAATCTGCCAGAAAGGTGTTGGGACCTGGATCCGGCTGCAACTCCAGATGAGCTTCTTCATGGTGCTACAGAAGAACCAAACGCTTTGTAG 2097 0.4325 MEANKEEALKAVEIAEKRFAVRDFAGAKNYAVKAKTLCPGLEGISQMVATFEVYIASEVKHNGELDYYSILGLKPFADKEAVKKQYKKLAVLLHPDKNKCVGADEAFKLVSEAWTWLSDSAMRSSYDLKRNAQLAGTNQMNLSPATGAAGYNKCSNLSSPRGGLDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVPGNGYGSHSFDGVSYVPPSAPYFNGNGVAGYNSGHGYDYIQNVSFWGSAGVVNQNGSTTLPADSVNRANGNVKRGRPKIKRHHHVADTMVNINSDVSFSCSEPQEDKLSRPDKKQKVAVGATFRNGYDEKGSKCALESIVSNGNDSTGHGQKPSCTVEVQTKHCSMAPAFDARKLLIEKARTEIRKKLEEMKLSSEAAAAALKEREKSEAQVGLVKRETCRKTSLNVSGLQLENGKAGPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEEDGMPRLYCMIREVVAINPFKILISYLSSKTDSEFGSVNWLDSGFTKSCGNFRAFNNDVVDHVNIFSHVLSQEKAGRGGCVRIYPRSGDIWAVYRNWSQDWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLVKLAGYKTVYQSNTDKSAIKWIPKREMLRFSHQVPSWLLKREAENLPERCWDLDPAATPDELLHGATEEPNAL* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2933 698 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pvu8g2933 698 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pvu8g2933 698 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pvu8g2933 698 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pvu8g2933 698 Pfam Domain of unknown function (DUF3444) 461 666 IPR024593 -
Pvu8g2933 698 PANTHER BNAC03G44070D PROTEIN 1 691 - -
Pvu8g2933 698 CDD DnaJ 66 119 IPR001623 -
Pvu8g2933 698 PANTHER BNAC03G44070D PROTEIN 1 691 - -
Pvu8g2933 698 Gene3D DnaJ domain 55 147 IPR036869 -
Pvu8g2933 698 Coils Coil 397 425 - -
Pvu8g2933 698 Pfam DnaJ domain 66 127 IPR001623 -
Pvu8g2933 698 SMART dnaj_3 65 122 IPR001623 -
Pvu8g2933 698 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2933 Pvu-Chr8 58980368 58983843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2933 4 298 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.745 2.05e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2933 - - vun:114194067 1325.07