Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2930 ATGTCTTCAACAACTTCTTCTTCTTCTTCCTCGTCAACATCATCGTCCACTTCAACCCCATATGACGTTGTTGCTGCTGATGTCCCTGGCCCTAGTACGAGGAGAACCACCGCTCAATTTGAAGGCCCTTCTTCCTCTCGTCAACGTGCTATGAATGAGGTTTTGCCTGAACCTTTTCTCGAAGCTTTGGCCAACCAACTTGCCCTTCATGCTGCAAACTACAATGGCCGTCTTGCTGCTGCTCCTGCCCTTGCCAATTTGTTTCAGGTTTGTTCCACGTGGCGGGAGGTGTCGCGCTCGGATCTGCTGTGGGAGCACCTCACGAGGCGCATCTGGCGAAGGACGTTCCGAGTGAGGGACACGTGGCACCGGGAGTACATCAACTGCCATCGGACGGCGAGGAACTTCGAGGATGGGAGGCTGTCGTCTTCGATTCCGCAGTTCGGCCATTCGGAGCATCGCCGGAGCTTGATCTGCCGCTGCCTCGTCCTCTCCGACACCCGCCTTGCGTGCGGCTTCGTTGACGGCACCGTGCGCGTGTTCGACCTCGAAACCAACGCCCACGTCAGCACCTTTCTCTCCGACCACGGCCACCTCTTCGGGCCGTTTTCGCGCTCCATCTCGGGAATTGTTATAACCGACTCCAACATCACTTTCGCCAGGCTGGACGGGGATATCTACGTGGACGCCATCAACGTGCATGGCCAGAGCCAAGCCCGCCGGGCCGTCTCGGGCTTCGTGATGAACAACGGGCCGTTGGTCGGGTTCGCAGGAACAAGGCGGTGGTGGGTGGGCTTGTTCGCCGGTATAGCAGGCCGTTCTTTTCAGGTGTGGAACGCGGAGAGTGGGGAGAGCGTGTTCGTTGGAGGGTCGTTGACGGATCCGGAAACGGTTATGGGGTGGCACATGCTTACGGAGTTGGTTGACCCGGTGGCGCGTGTGCGCGTGACGGAGGGTGAGTTCGTGGTGGCGTGCACTGGTTTGAGGCTGGTTTGTTTCAATGCTTGGAACCCGGAGGTTCTGCTGAGGGACGCTGTGTCGGCGTCGGGGTTCGTGGTGAATTCGATGGACGTGAGCGAGGAGGCTTTTGTGGTGGTGGAGCGTGGGGGAGTGGGAACGGTGTGGCGCGTGGGGACGATGGAGTTGATGAGCAGGTTTCGGTTGAGGGGTTCGTGGGTTCGAGGGTTGTGGGGTTGCATGAACCTTGGGTACGTGTTGACCTATTCTCCCAACCCTGCACCATTCTTGAGGGTTTGGAACATTGAACAAGAGGAAGGAAGGTTGTGTGTGAGAGTGTTTCTGCGTGCAGGTGAGGTGAGTAGCATGGTGGCTCATCACTCGCACATGGCTTTCTCTTCCAACAACATTAACCTGTTGGATTTTGGTGTACATGATGAGGAACCTTAG 1407 0.5729 MSSTTSSSSSSSTSSSTSTPYDVVAADVPGPSTRRTTAQFEGPSSSRQRAMNEVLPEPFLEALANQLALHAANYNGRLAAAPALANLFQVCSTWREVSRSDLLWEHLTRRIWRRTFRVRDTWHREYINCHRTARNFEDGRLSSSIPQFGHSEHRRSLICRCLVLSDTRLACGFVDGTVRVFDLETNAHVSTFLSDHGHLFGPFSRSISGIVITDSNITFARLDGDIYVDAINVHGQSQARRAVSGFVMNNGPLVGFAGTRRWWVGLFAGIAGRSFQVWNAESGESVFVGGSLTDPETVMGWHMLTELVDPVARVRVTEGEFVVACTGLRLVCFNAWNPEVLLRDAVSASGFVVNSMDVSEEAFVVVERGGVGTVWRVGTMELMSRFRLRGSWVRGLWGCMNLGYVLTYSPNPAPFLRVWNIEQEEGRLCVRVFLRAGEVSSMVAHHSHMAFSSNNINLLDFGVHDEEP* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2930 468 Gene3D - 46 135 - -
Pvu8g2930 468 SUPERFAMILY F-box domain 83 131 IPR036047 GO:0005515
Pvu8g2930 468 MobiDBLite consensus disorder prediction 32 49 - -
Pvu8g2930 468 MobiDBLite consensus disorder prediction 1 22 - -
Pvu8g2930 468 MobiDBLite consensus disorder prediction 1 49 - -
Pvu8g2930 468 SUPERFAMILY WD40 repeat-like 146 453 IPR036322 GO:0005515
Pvu8g2930 468 Gene3D - 136 464 IPR015943 GO:0005515
Pvu8g2930 468 PANTHER WD40 REPEAT PROTEIN 12, 37 7 463 - -
Pvu8g2930 468 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 7 463 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Pvu8g2930 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2930 - - gmx:100807240 628.246