Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2914 ATGCCACTAACCCTAAATCTCACGCAGCTCACCGGTGCCGCCACGACCATCCGATCTCCGCCCAGTGTCACCACCATCCGGGCATTCACGGCGACGATCGATTCCCGGAGGCCGGCGAGCTTCTATGAAGTTCTGCGCATCAAGCAGAACGCGTCGTCGGTGGAGATAAAATCGGCGTACCGGAACCTGGCCAAGGTGTACCACCCTGATTCGTCGCTCCGGCGATCGGAATCGGACGAACGCGACTTCATCCAGATCCACGACGCGTACGAGACGCTGTCGGATCCGTCGGCGAGAGCGGTCTACGATCTGTCGTTGATGGCGGTGCGCGGCGGTAACGGCTCCTTCTCTTCTTTGGTTGCTCCGAATGGATCTTCCGGGTTGTACTACCAGACCCGCAAGTGGGAAACGGATCAGTGCTGGTAG 426 0.5962 MPLTLNLTQLTGAATTIRSPPSVTTIRAFTATIDSRRPASFYEVLRIKQNASSVEIKSAYRNLAKVYHPDSSLRRSESDERDFIQIHDAYETLSDPSARAVYDLSLMAVRGGNGSFSSLVAPNGSSGLYYQTRKWETDQCW* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2914 141 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Pvu8g2914 141 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 26 141 - -
Pvu8g2914 141 Gene3D DnaJ domain 29 115 IPR036869 -
Pvu8g2914 141 ProSiteProfiles dnaJ domain profile. 40 106 IPR001623 -
Pvu8g2914 141 CDD DnaJ 41 95 IPR001623 -
Pvu8g2914 141 SUPERFAMILY Chaperone J-domain 40 119 IPR036869 -
Pvu8g2914 141 PRINTS DnaJ domain signature 42 60 IPR001623 -
Pvu8g2914 141 PRINTS DnaJ domain signature 60 75 IPR001623 -
Pvu8g2914 141 PRINTS DnaJ domain signature 78 98 IPR001623 -
Pvu8g2914 141 Pfam DnaJ domain 41 103 IPR001623 -
Pvu8g2914 141 SMART dnaj_3 39 98 IPR001623 -
Pvu8g2914 141 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 26 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2914 Pvu-Chr8 58835488 58836332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2914 42 103 C2H2 Transcription Factor Family AT1G74250 43.939 1.64e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2914 - - gmx:100786034 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2914 8 58835488 58836332 Pvu8g2914 8 58835488 58836332 ECH
Pvu6g0637 6 17784549 17785007 Pvu8g2914 8 58835488 58836332 PCT