Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2907 ATGCCACAGGAACCTTTAGCACACTCGATTTTCGCATCTCCTCTTAAGAGAGGATTGAATTTGAAAAGTTCAGGTTCAGTTTGTAACAACAATGAGGCTTCATACACCGTGATGGCGGAGGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGATACGAAGCAGCAGAATGGCTTGCCCAAATGGACAATGGCGCATCTTCATCTCTCTCCAAAGAACCCTCCGAAGAGGAATTCTGCCTCGCACTGAGGAACGGTCTCATTCTCTGCAACGTCCTCAACAGAGTCAACCCCGGCGCCGTCGTCAAGGTTGTCGACAATGCGGTGGTCGACAACCTCGCCCTTCCGTCTTCCGAGGGACCCGCCCAGTCCGCAATTCAGTATTTCGAGAACATGCGAAACTTTCTGGAGGCCGTCACCAACATGAAGCTTTTGACATTCGAAGCTTCTGATTTGGAAAAGGGGGGTTCGTCGAGCAAAGTTGTGGACTGCATTCTGTGTTTGAAAGGGTATTATGAATGGAAGCTGTCGGGTGGAGTTGGTGTGTGGAGATATGGTGGAACTGTCAGGATTACTTCCTTCCCCAAATGGTCTCCTTCCAACATACTCGGCACTGAAAGTGTTGACGAGTCTGAGTCATCACAGTTTCTTCATCTGTCTGGAGAGGTATCCATTGAAGAAACCAAAGCTGCTAATGCTTTGACTTCCTTTTTTGATCAGTTTGGACTCAAGCTTCTCCTGGCTTACCTCAAAGAAGCTGATGAGGTTGATGATCTACCGTTGAATGCAATGGTAATAGATTCTTTGCTCAGGAAGGTTATCAGGGATTTTTCTGCATTGCTTGATTCTCAAGGCACTCAGCTTGGACATTTCCTCAAGAAAATATTGAAAGGTGATACTGGTTGCCTCTCTAAGAGAGAATTTGTGGACGCTATCACATTATATCCGAATCAAAGACGTAGTTTGGCATCAAATGAAAGCTCTAAACTATGCACTTGCGGTGGAAAACGCGACAGTAATCAGCGCAATGACAAATATTGCGCCAAGCATGCTGAAATAATTGATGCCCAGCAAAAAGAGCTTGAGGGACTGAGGTACTTCTATGAAGAGATAAAATTGGAGCTCAAACAACTTCAATCGAAGTGGGACCAAGAATTGAACAGGCTTGAGAATCATATAAGGAGCCTTGAAGAGGCCTCCTCTTCGTATCATCAAGTTTTGGAGGAGAATCGTTTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGGCCCTTCTTGCCAGGGCAACCAAATGGACAATCTACTGTAGATTATATAGGAGAAAATGGAAACATAATGATTATGAATCCCCTTAAGCAAGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAACAAGTGCCACCCAAGAACAAATATACGCTGACACTCAACCATTGGTTAGGTCCGCCTTAGATGGATATAATGTATGCATCTTTGCATATGGACAGACTGGGTCAGGAAAAACCTACACAATGAGTGGTCCTGATCTGATGACTGAAGAGACATGGGGTGTAAACTACAGGGCTTTGCGTGACTTATTTCATATTTCAAAGGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATACAATGAGCAAGTGAGAGATTTACTAGTCAGCGACGGCTCTAACAGAAGATTGGATATACGAAACAACTCTCAATTGAATGGGCTTAATGTGCCGGATGCATCTTTAGTTCCGGTTAATTGCACACAGGATGTTCTTGATTTAATGAAAGTTGGTCAGAGGAATCGTGCTGTTGGTGCTACAGCTCTAAATGAGCGAAGCAGCCGTTCTCATAGTGTATTGACAGTTCATGTCAGAGGGAGGGACTTAGAGTCTAACTCTATTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGACAAGTCCGAGGCTGTTGGCGAGAGACTAAAGGAGGCTCAGCATATAAATAAATCTCTTTCTGCACTTGGGGATGTTATTGCTGCTTTGGCCCAGAAGAGTCAACATATTCCTTACAGAAATAGCAAGCTCACACAAGTTCTACAAGATTCATTAGGTGGTCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAGCTTAATGCTCTTGGAGAGACAATTAGCACACTTAAGTTTGCAGAGAGGGTTGCGACCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGAGAAATTCGGGAGCTAAAGGAAGAGATATCAAATATGAAATCAGCATTGGAGAGGAAGGAAACTGAACTACAGCAATGGAAATCTGGGAATGCACGAAATCCTACAGAATCTCAGAAAGCACCAAGAGCTGTTTCACCTTTCCGTTTGCCCAAAAATGGTACCAGTGACAGCATGAAGCCTGAAAACTATCAAAGACACATGGACGATAGAAGTTCTGAGGCTAAAACTTGTTCTTCGGGTAAGCAAAGAAGGTCAAGATTTCCCTCAACTCATACAGAAAAGGAGTCAATGCCAAAAATGTCCATTCTGGCAGAAGAAAAATTAGTGAGCTCAGGGAAAAGTAGATCACCATCTCCTCCAGTAAGGAGGAGATCAATATCCTCTGGTAGAGGGTCAGTCATTAAAAGCAAGGTCCGAAGTGACACAGCAGAAAATCAACCAATATTAAAGCATCTTCTTCCATCTAGAGTACTAGTAAATAAATCTCTTGTCACAATGCCAATGCCCTCCTCTATAGACAATAACTCAAGGGTGAATCTGCATTCACAGGAGTCAGTGAAGCAAGATCGCACTAATGAAACTCTCTTCAACAACCTCCAGAAGATAAACTCCCGAAAAGTTAATCAAGAACATGAAGAGGAACAACTCAAGCAAGCTGCTCTTGGTGTGGTAAGACAAGGTGGAACTAGGAAAAACAAGGCCAAGGTTAAGCCTCATCAACAGTTTCCCTTTAGGATTCAAAGGCCTGATATGATGATACCTATTTCTGACATGGAAATTGGCCGTGATATGATCGTGGAAGCACCTCGAAAGAGCAATTATTGTGAGCCAGAAAATGATATAAGCCTAATGGAGTCTGCAGTCCACGGTGTTAATCTTAAAAAGATAAACCATAACATCTCTAGGAATTTTCAGAACATTGGATCAAGAGGAATAGTCCAAGCAGCTGAACCATTATTGTCCAGCAAAGTTGAAAATAAAATATTTCAACATGGTTCAGGACGCAATCTTAAGGAAGGCACCAACATTACATTGCCTGAATTTAGAAGGAGTCGATCTACTCCACGTGGAAAGTTTTCTGTTTTATCTTGA 3405 0.4273 MPQEPLAHSIFASPLKRGLNLKSSGSVCNNNEASYTVMAEESINDHELAQRKAEEAASRRYEAAEWLAQMDNGASSSLSKEPSEEEFCLALRNGLILCNVLNRVNPGAVVKVVDNAVVDNLALPSSEGPAQSAIQYFENMRNFLEAVTNMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKWSPSNILGTESVDESESSQFLHLSGEVSIEETKAANALTSFFDQFGLKLLLAYLKEADEVDDLPLNAMVIDSLLRKVIRDFSALLDSQGTQLGHFLKKILKGDTGCLSKREFVDAITLYPNQRRSLASNESSKLCTCGGKRDSNQRNDKYCAKHAEIIDAQQKELEGLRYFYEEIKLELKQLQSKWDQELNRLENHIRSLEEASSSYHQVLEENRFLYNQVQDLKGAIRVYCRVRPFLPGQPNGQSTVDYIGENGNIMIMNPLKQGKDARRVFSFNKVFATSATQEQIYADTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDASLVPVNCTQDVLDLMKVGQRNRAVGATALNERSSRSHSVLTVHVRGRDLESNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVIAALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVATIELGAAQSNKETGEIRELKEEISNMKSALERKETELQQWKSGNARNPTESQKAPRAVSPFRLPKNGTSDSMKPENYQRHMDDRSSEAKTCSSGKQRRSRFPSTHTEKESMPKMSILAEEKLVSSGKSRSPSPPVRRRSISSGRGSVIKSKVRSDTAENQPILKHLLPSRVLVNKSLVTMPMPSSIDNNSRVNLHSQESVKQDRTNETLFNNLQKINSRKVNQEHEEEQLKQAALGVVRQGGTRKNKAKVKPHQQFPFRIQRPDMMIPISDMEIGRDMIVEAPRKSNYCEPENDISLMESAVHGVNLKKINHNISRNFQNIGSRGIVQAAEPLLSSKVENKIFQHGSGRNLKEGTNITLPEFRRSRSTPRGKFSVLS* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2907 1134 Coils Coil 970 990 - -
Pvu8g2907 1134 MobiDBLite consensus disorder prediction 793 913 - -
Pvu8g2907 1134 Pfam Calponin homology (CH) domain 59 181 IPR001715 GO:0005515
Pvu8g2907 1134 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 22 1129 - -
Pvu8g2907 1134 ProSiteProfiles Calponin homology (CH) domain profile. 57 181 IPR001715 GO:0005515
Pvu8g2907 1134 ProSiteProfiles Kinesin motor domain profile. 431 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu8g2907 1134 MobiDBLite consensus disorder prediction 797 811 - -
Pvu8g2907 1134 Gene3D Kinesin motor domain 374 761 IPR036961 -
Pvu8g2907 1134 SMART ch_5 59 179 IPR001715 GO:0005515
Pvu8g2907 1134 CDD KISc_C_terminal 429 761 - -
Pvu8g2907 1134 Gene3D - 49 181 IPR036872 -
Pvu8g2907 1134 Coils Coil 376 407 - -
Pvu8g2907 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 796 IPR027417 -
Pvu8g2907 1134 Coils Coil 766 800 - -
Pvu8g2907 1134 SUPERFAMILY Calponin-homology domain, CH-domain 51 209 IPR036872 -
Pvu8g2907 1134 PRINTS Kinesin heavy chain signature 506 527 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu8g2907 1134 PRINTS Kinesin heavy chain signature 629 646 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu8g2907 1134 PRINTS Kinesin heavy chain signature 660 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu8g2907 1134 PRINTS Kinesin heavy chain signature 709 730 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu8g2907 1134 MobiDBLite consensus disorder prediction 882 913 - -
Pvu8g2907 1134 Pfam Kinesin motor domain 437 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu8g2907 1134 SMART kinesin_4 429 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu8g2907 1134 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 1129 - -
Pvu8g2907 1134 MobiDBLite consensus disorder prediction 832 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2907 Pvu-Chr8 58787402 58796821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2907 367 759 Calmodulin-binding Proteins AT5G65930 42.172 7.98e-79 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2907 K10406 - gmx:100811516 1885.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0621 6 17627928 17634251 Pvu8g2907 8 58787402 58796821 PCT