Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2897 ATGGAGAATGAAAGAGAAGAAGAGATTGAGGACATGTCAATGTCACCCCCATCTCTTGGCTCCATGCAATTTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCTTATCTTCCGAATATGTACACAGAGATTGACATCAAAATTGAGGATTCCAATTTCAACCAAGATCCCCCCTTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTATAAGGTGAGAGGTAGCCAAGTGGCTTCCACTAATCCTGTGAAGTCAGTGATGTCAAAAGTTGCCACACAACACACCATGGAAGAAGATAGATACAAGAAAATTTTGAAGGGTATGACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACAACCTTGTTGAGAGTTGTAGGGGGAAGATTGGTAGACAATGTAAAGGGAAAGATAACTTACAATGATGTTCGATTTAATCCTGCTGTCAAAAGGAGGATTGGCTTTGTTACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAGGAAACATTAATCTTCTCAGCATTCTTAAGGTTACCAAGCAATATGAGCGAGCAACAAAAATATGCAAGAGTGGAGACCACTATCAAGGACCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAAGCATCTCTGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATCCTTGTTGATCCTTCACTGCTTCTACTTGATGAACCAACTTCAGGCCTTGATTCCACAGCAGCTAACAGACTCCTTGTCACTCTTCAAGGACTTGCCAAGGGTGGAAGAACCATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTTATATCAGAAGGATACCCCATTTACTATGGGAAGGCGAAGGACGCAATGCAGTACTTTTCATCGTTGAGGTTCACCCCAGAAATACCAATGAATCCTGCAGAATTCATGCTTGACTTGGCAACTGGACAAGTGAATAACATAAGCTTTCCACAAGATGTTTTCAAAGAACAAGATTCTGCTGACAGTTCAAAATCTGTTATTGAATATCTACAACTCAAGTATAAAGAAACACTGGAACCAAAAGAAAAAGATGAGAATCATGGAGCAGCAAACACACCAGAACATCTTCAGCTAGCCATTCAGGTTAAAAAGGACTGGACAGTGAGTTGGTTGGACCAATTCTTCATTCTTTACAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAATTAAGATTAGTTCAAGCACTTGGCATTGCTCTTCTGTTGGGCCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAAGTTAGAGATCAGGTTGGTTTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTCTTTCCTTTTGAGAAGATCTACTTGGTGAAAGAAAGGAAAGCAGACATGTATAGACTGAGTGTATACTATGTAAGCAGCACTCTGTGTGACATGGTGGCGCATGTTTTTTACCCTACATTTTTCATGCTCATCTTGTACTTCATGGCTGGATTTAAGAGAACCGCTGCATGCTTCTTCCTGACTTTGTTCGCGGTGCTGTTAATAGCTATAACAAGTCAAGGTGCTGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGGATAGTTGCTTCTTTGGTACTAATGTTGTTCCTTCTCACCGGTGGCTACTATGTCCAGCACGTACCGAAGGTGATGCAGTGGCTGAAGTATTTGTCGTTCGTGTACTATGGGTTCAGACTTCTTCTAAAAGTGCAGTATTCAGGAGAAGAACTCTATGAGTGTGAAAGCAAAAGAGGGTGCAGAACACTGCAGAGTTCACCAACATTTGACACAGTAAACTTGGAAGGAGGCTTAACTGAAGCATGGGTTCTCATAGCCATGGCTCTCTGCTTCCGTGTCTTTGCCTACTTCTGTCTCCGCAGACGAATTGATGTTCGCAATTAG 2061 0.4187 MENEREEEIEDMSMSPPSLGSMQFAGSNGFGHSMEFMSQAYLPNMYTEIDIKIEDSNFNQDPPFPIYLKFEDVEYKVRGSQVASTNPVKSVMSKVATQHTMEEDRYKKILKGMTGSIGPGEILALMGPSGSGKTTLLRVVGGRLVDNVKGKITYNDVRFNPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPSNMSEQQKYARVETTIKDLGLERCRHTKIGGGYLKSISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTAANRLLVTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKAKDAMQYFSSLRFTPEIPMNPAEFMLDLATGQVNNISFPQDVFKEQDSADSSKSVIEYLQLKYKETLEPKEKDENHGAANTPEHLQLAIQVKKDWTVSWLDQFFILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQVRDQVGLMFYICIFWTSSCIFGAVYVFPFEKIYLVKERKADMYRLSVYYVSSTLCDMVAHVFYPTFFMLILYFMAGFKRTAACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGIVASLVLMLFLLTGGYYVQHVPKVMQWLKYLSFVYYGFRLLLKVQYSGEELYECESKRGCRTLQSSPTFDTVNLEGGLTEAWVLIAMALCFRVFAYFCLRRRIDVRN* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2897 686 Gene3D - 95 327 IPR027417 -
Pvu8g2897 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 95 332 IPR003439 GO:0005524
Pvu8g2897 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 682 - -
Pvu8g2897 686 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Pvu8g2897 686 SMART AAA_5 119 310 IPR003593 -
Pvu8g2897 686 CDD ABCG_EPDR 65 314 - -
Pvu8g2897 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 682 - -
Pvu8g2897 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 325 IPR027417 -
Pvu8g2897 686 Pfam ABC transporter 110 260 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2897 Pvu-Chr8 58731844 58735955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2897 108 293 Calmodulin-binding Proteins AT2G36910 29.293 1.91e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2897 K05681 - gmx:100815259 1235.71