Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2882 ATGTCCATGGTTGTCTTCTTCTTCTTCATGCTGTTCTTCGCCGCCTCGTGTGACGTCACAGCCACAGAAAACAGCGTCAGCTTCTCCTTCTCTTCTTTCACTCTCAACAACACCAACTTCACCCTTCTCGGCGATTCCTCTCTATGTACCAACGGCGTCGTGAGACTCACCAACGCCGCCATCACTTCCAGCTCCGGCGCCGTCATCTACACCTATCCCATCCCACTCTTCCACCCTCCAACCGCCACCTTCGCCTCCTTCTCCACCACCTTCTCCTTCTCCATCAGCAACCTCAACCCCACCTCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCCAACCTCTCCTTCTCCGCCCCACTGGGGCTTCCCTCCGCCTTCGTCGCCGTCGAGTTCGACACGCGCCTCGACTCCCGCTTCGACGACCCCAATGAGAACCACGTCGGCTTCGACGTCGACGCCATGAAGTCCCTCAAAACCGGTGACCCCATCTTGCACGGCATCGACCTCAAGAGCGGCAACACCATCATTGCATGGATCGACTACAACGCCGATCGAACTCTGGTCACCGTTTTCTTGAGCTATTCACTTCCGAAACCCGTCGACCCTGTTCTCTCCGTCAAGTTCAATCTTTCTAAACACTTTAGAAACCCCGTCTACGTTGGATTCTCCGCTTCCACTCCAGGAATCACCGAGATTCACCAAATCCATAGTTGGACCTTTCGCAGTGCTTTTGCTCCCGCAAGAACGAGGTTGCCCCCTCACAACGTTTCCGTGGTGGGAACTGTTCCTGTTTCTGGCTCAGGTTCTGCCTCCGTTTCTAACTCTACTTTTTCCAAGAAGCGTGACAAGGGGGCTGGCATTGGTGTGCTTGTTGCGGGTTCTGTTGCTTTCTTTGTGGTTTTTTCAATCTTGGGTTATGTTTTTGTTCGGAGACAGAGGGGTGGGAGAGCAGAGGATTTTCAGAATGGTTTCGTGGCGTGTCCGAGGGCGTTTGATTACAGAGAGTTGAAGTCCGCGACAAGAGAGTTTCACCCGAGTAGGATTGTTGGACATGGATCATTTGGGACGGTGTACAAGGCTTTCTTTATCTCTTCCGGAACCATTGCAGCAGTGAAAAGGTCGCGGCACTCTCACGAAGGGAAAACAGAGTTTCTGGCAGAACTCTCCATCATAGCCGGTTTGCGCCACAAGAATTTGGTTCAGCTGCAAGGATGGTGCGTCGAGAAGGGGGAGTTGTTGCTGGTGTATGACTTCATGCCGAATGGAAGCTTAGACAAGATGCTTTACAAGGAACCTGAAAGGGGGAGGTTGTTGAGTTGGTCCGACAGGGTGAACATTGCTCTTGGGTTGGCCTCTGTTCTGGTTTACCTTCACCAAGAATGTGAGCAGAGAGTGATTCACAGGGACATCAAGGCAGGGAACATATTGCTGGATGGAAACATGAACCCCAGGTTGGGGGATTTTGGATTGGCAAAGCTCATGGATCATGACAAGAGTCCAGTCTCCACTCTGACTGCCGGAACAATGGGGTACCTTGCACCAGAGTATCTTCAGTACGGAAAAGCCACTGAAAAGTCTGATGTTTTCAGCTATGGGGTGGTGGTGCTTGAAGTGGGGTGTGGGAGGAGGCCAATTGAGAGAGAAGGGACGAAGATGGTGAACCTGATTGAGTGGGTTTGGGGGCTGCACCATGAGGGGAGGGTGGTTGAAGGTGCTGATAAGAGGTTGAATGGGGAATTTGAGGAAGAGGAAATGAGGAAGCTTTTGCTCTTGGGATTGAGTTGTGCTAACCCTGATAGTGCAGAGAGGCCTTCCATGAGAAGGGTGCTTCAGATTCTGAACAATGAAGCTCCACCACTTTTTGTGCCAAAAGTTAAGCCAACACTCACCTTTTCTTCTGACCTTCCCCTCACCATTGAAGACATCATGTCTGATGGTGAAGAGTTCAGTACCAGCCAATCTATGTGTGAGATCAAAATCAACTGA 1989 0.5168 MSMVVFFFFMLFFAASCDVTATENSVSFSFSSFTLNNTNFTLLGDSSLCTNGVVRLTNAAITSSSGAVIYTYPIPLFHPPTATFASFSTTFSFSISNLNPTSSGDGLAFFLSPNLSFSAPLGLPSAFVAVEFDTRLDSRFDDPNENHVGFDVDAMKSLKTGDPILHGIDLKSGNTIIAWIDYNADRTLVTVFLSYSLPKPVDPVLSVKFNLSKHFRNPVYVGFSASTPGITEIHQIHSWTFRSAFAPARTRLPPHNVSVVGTVPVSGSGSASVSNSTFSKKRDKGAGIGVLVAGSVAFFVVFSILGYVFVRRQRGGRAEDFQNGFVACPRAFDYRELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGRLLSWSDRVNIALGLASVLVYLHQECEQRVIHRDIKAGNILLDGNMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKSDVFSYGVVVLEVGCGRRPIEREGTKMVNLIEWVWGLHHEGRVVEGADKRLNGEFEEEEMRKLLLLGLSCANPDSAERPSMRRVLQILNNEAPPLFVPKVKPTLTFSSDLPLTIEDIMSDGEEFSTSQSMCEIKIN* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2882 662 Gene3D Phosphorylase Kinase; domain 1 310 419 - -
Pvu8g2882 662 SMART serkin_6 344 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2882 662 ProSiteProfiles Protein kinase domain profile. 344 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2882 662 PANTHER - 21 634 - -
Pvu8g2882 662 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Pvu8g2882 662 Gene3D Transferase(Phosphotransferase) domain 1 420 619 - -
Pvu8g2882 662 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 21 634 - -
Pvu8g2882 662 Pfam Protein kinase domain 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2882 662 Gene3D - 23 256 - -
Pvu8g2882 662 SUPERFAMILY Protein kinase-like (PK-like) 327 637 IPR011009 -
Pvu8g2882 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Pvu8g2882 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 245 IPR013320 -
Pvu8g2882 662 CDD STKc_IRAK 350 616 - -
Pvu8g2882 662 ProSitePatterns Legume lectins beta-chain signature. 128 134 IPR019825 -
Pvu8g2882 662 Pfam Legume lectin domain 26 249 IPR001220 GO:0030246
Pvu8g2882 662 CDD lectin_legume_LecRK_Arcelin_ConA 36 243 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2882 Pvu-Chr8 58612825 58615119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2882 3 649 Receptor kinase-like Gene Family AT5G55830 55.882 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu8g2882 Pkinase 9.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2882 - - gmx:102668712 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0606 6 17485761 17487917 Pvu8g2882 8 58612825 58615119 PCT