Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2873 ATGGCCAACAATGATGTAAAGGAGCCCTTGCTGTCAGGGTCACTGGATGAGACTCAAAAGGTTAAACGGCAGTTAAACAGGAGAAGGTTACACCGTTCTAGAAGTGCTCCACACACAGAAGGTGTTCCTTCTGAGAGACAAGGCAAAGAATCAACTCCTCAAACTGCATCCATATTTCAGAATTTACACCCAAATTTCAAAAGAGTGGCTATCTACCTCGCAGTATATTTAGGTGTAGGTGCTTTGATCTTCTTCCTTGTCAGGGACCAGATTAAGGGGACGAAAACAAATGGAATTCTTGATGCTTTATACTTCACAATTGTTACAATGACCACTGTTGGATATGGAGATCTTGTACCAAACAGCCACCTAACAAAACTATTTGCATGTGCCTTTGTTTTCTCTGGGATGGCATTGATTGGTATAACTGTAAGCAAAGCAGCAGACTACTTAGTTGAGAAACAGGAACTTTTGATAGTTAAAGCTATGCACATGCACCAAAAAGTTGGTTTAACTGGAATTTTAAGGGAGCTTGAGACCAACAAAACAAGATACAAACTTTTTGTAGTCTTTTTCCTCCTTTTGATTCTGATCATTGCGGGGATAATTTTTTTGGTCACTGTTGAGAAATTGGATGTTATTGATGCATTCTACTGTGTTTGTTCTACAATCACAACCCTTGGCTATGGAGACAAAAGTTTCTCAACTCAAGCAGGAAGAATATTTGCAGTGTTTTGGATATTGACAGGTACTATTACTTTAGCTCAGTTTTTCCTCTACATTGCAGAGCTAAACAGTGAAATCAGACAAAAGGAACTTGTGAAGTGGGTGCTTACAAGGAAAGTGACCAATTTAGATTTGGAGGCTGCAGATCTTGATGAGGATGGGAGTGTTGGGGCTGCTGAATTTGTTATATATAAGCTGAAAGAGATGGGGAAGATCAGTGAAGAAGATATATCACTTGTGATGCAGGAGTTTGAACAGCTAGATGTTGATGATTCTGGTACACTGTCAACTTCAGATATAACACTTGCTCAGTCATCTTAG 1047 0.3945 MANNDVKEPLLSGSLDETQKVKRQLNRRRLHRSRSAPHTEGVPSERQGKESTPQTASIFQNLHPNFKRVAIYLAVYLGVGALIFFLVRDQIKGTKTNGILDALYFTIVTMTTVGYGDLVPNSHLTKLFACAFVFSGMALIGITVSKAADYLVEKQELLIVKAMHMHQKVGLTGILRELETNKTRYKLFVVFFLLLILIIAGIIFLVTVEKLDVIDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTITLAQFFLYIAELNSEIRQKELVKWVLTRKVTNLDLEAADLDEDGSVGAAEFVIYKLKEMGKISEEDISLVMQEFEQLDVDDSGTLSTSDITLAQSS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2873 348 Gene3D - 167 277 - -
Pvu8g2873 348 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 17 342 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pvu8g2873 348 SUPERFAMILY Voltage-gated potassium channels 178 284 - -
Pvu8g2873 348 SUPERFAMILY EF-hand 250 344 IPR011992 -
Pvu8g2873 348 Pfam Ion channel 193 264 IPR013099 -
Pvu8g2873 348 Pfam Ion channel 72 152 IPR013099 -
Pvu8g2873 348 Gene3D - 63 157 - -
Pvu8g2873 348 MobiDBLite consensus disorder prediction 1 54 - -
Pvu8g2873 348 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 17 342 - -
Pvu8g2873 348 PRINTS Two pore domain K+ channel signature 108 136 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pvu8g2873 348 PRINTS Two pore domain K+ channel signature 225 234 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pvu8g2873 348 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
Pvu8g2873 348 SUPERFAMILY Voltage-gated potassium channels 66 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2873 Pvu-Chr8 58581933 58584868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2873 53 348 Ion Channels AT5G55630 67.568 6.26e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2873 K05389 - gmx:100777388 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2873 8 58581933 58584868 Pvu8g2873 8 58581933 58584868 ECH