Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2869 ATGATGATGATGAAGTTGGTGTCTTCCAGAGTTCTGTTTTTGTTTGTGTCGGTTTTCGTGATGTGGGTTCGTGTGAATTTAGCAGAAGGTGAAAATGGGCATGGTGGTATTAGGAACTACATTAGTTGGGAAGATTTGCAGGTGGATGAGCAAAGGTTGACCTTGAAGCGCCATGACGATGTTCGAGTTATTGTTGTGAACAAATATGGTGGGGGACACTCCAAAACTGTTCAAGGTGCTGTGGATATGGTTCCTGAAAATAACAAACATAGGGTGAAAATTTACATTTATCCAGGAATTTACAGAGAGAAAGTGCGTGTGGCTGTGAACAAGCCTTATGTATCATTCGTAGGGAAAAGAAATCAAACAGCAAGTCCTGTTATTACTTGGAACAGTAAGTCATCTGATAGAGGCACAAATGGTCAGGCACTGGGCACCTTTGATACAGCAACAGTTGGAGTGGACTCTGATTATTTCTGTGCAACTGGGATCACTTTTGAGAACTCAGTGATTGCAACGGCTGGTGTAAAAGGGATGCAAGGAGTGGCACTGAGGGTGAACAGTGAAAGAGCCATGTTCTATCAAGTGAGGATTAAGGGAGCACAGGACAGTCTCTTGGACAACACAGGAAATCATTACTTCTTAGAGTGTGACATCCTAGGAAAAGTTGATTTTATCTTTGGCAGTGCAAAATCACTCTACAAGAATTGCCTTCTGCAGTCAATAACGGACGACTTTGGAGCAATAGCAGCACATCATAGGAATTCAGCAACTGAAGACACAGGTTTTTCTTTTGTAGGGTGCAATATCAGAGGAAGTGGCAGAGTATACCTTGGCAGAGCATGGGGGAACTACTCTAGAATTATATACTCCAAATGCAATATGGATGACATTATCATTCCTGAAGGGTGGTCAGATTGGAATCAATCAGATAGAAAGAAGACTGCAGTGTTTGGTGAGTATCTATGCGATGGAAAAGGAGCAGATAGAAGCAACAGGGCACCTTGGTCAAAGTCATTCAGCTATGATGAAGTAGCACCTTTCCTTCATAAGAGTTTCATAGATGGAGACGAGTGGCTCAGACTATAA 1089 0.4233 MMMMKLVSSRVLFLFVSVFVMWVRVNLAEGENGHGGIRNYISWEDLQVDEQRLTLKRHDDVRVIVVNKYGGGHSKTVQGAVDMVPENNKHRVKIYIYPGIYREKVRVAVNKPYVSFVGKRNQTASPVITWNSKSSDRGTNGQALGTFDTATVGVDSDYFCATGITFENSVIATAGVKGMQGVALRVNSERAMFYQVRIKGAQDSLLDNTGNHYFLECDILGKVDFIFGSAKSLYKNCLLQSITDDFGAIAAHHRNSATEDTGFSFVGCNIRGSGRVYLGRAWGNYSRIIYSKCNMDDIIIPEGWSDWNQSDRKKTAVFGEYLCDGKGADRSNRAPWSKSFSYDEVAPFLHKSFIDGDEWLRL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2869 362 PANTHER PECTINESTERASE QRT1 21 362 - -
Pvu8g2869 362 Gene3D - 60 362 IPR012334 -
Pvu8g2869 362 Pfam Pectinesterase 64 357 IPR000070 GO:0030599|GO:0042545
Pvu8g2869 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 21 362 - -
Pvu8g2869 362 SUPERFAMILY Pectin lyase-like 63 360 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2869 Pvu-Chr8 58561060 58564126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2869 1 314 Carbohydrate Esterase AT5G55590 50.599 1.95e-118 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2869 K01051 - gmx:100813382 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2869 8 58561060 58564126 Pvu8g2869 8 58561060 58564126 ECH