Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2868 ATGAGGTTAATGTTATTATCAGGTTTGGTTTTCTTGGTTTTGCTGTTGAAGTGTGTTGGGGTGAAGGGTGATACCGATAGTGATCATGCTAGAAACGTGATTACGTGGGATGATTTCTTGGTGGATGAAGAAGGGACAACATCCAACGTTGGTGGTCGAGTTATTGTGGTCGATCAAAGTGGTAATGGAGATTCAACAACGGTTCAAGGAGCTGTGGATATGGTTCCACAAAACAACACACAAAGGGTCAAGATATACATTTATCCTGGAATTTATAGAGAAAGAGTGAATGTGCCGAAAAGCAAGCCGTTCATATCATTAATAGGTAAACCTAATATAACAATGGATGCAAATATAGCGGCTATAGGTAATGGCATTGGCTTAGCTATTATCACAAACAGTACAAAGGCATCAGATAAAGACTCCAACGGCAAACAAATGGGCACAATTAGTACAGCAACTGTGTGGGTACAATCTGATTTTTTCTGCGCAACTTCTCTCACAATTCAGAATTTGGTAGATAAAGATGCAGATAAACGTCAAGCAGTAGCATTGCGTGTAGACGGTGATAAAGCTGTATTCTATGGAGTTAGGCTTGTGGGGGAGCAAGACACCCTCCTTGATAACACAGGAATCCATTATTTCTACCGAAGTTACATTCAAGGATCTGTTGATTTTATATTTGGCAATGCCAAATCGTTGTTTCAAGAGTGTGTTCTATACTCTGTAGCTGAGTTTTGGGGAGCAATTGCAGCTCATCACAGAAACTCAGAAGATGAAGATACAGGTTTTTCATTTGTTAACTGCACAATCAAAGGAAGTGGTAGAGTATTTCTTGGGAGAGCATGGGGGAACTATGCAACAACAATATATTCAAACTGTGACATGGATGATGTTATTAATCCCTTGGGATGGAGCGATTGGAATGATCCATCAAGACAAGAGACTGCAATGTTTGGGGAGTATGAGTGTTCAGGAAAAGGATCAAACAGAAGTGAGAGAGTGGAATGGTCAAAAGCTCTAAGCAGAGAAGAAGCTGTGCCTTTTGTGAGCAGAGACTACATATATGGAGATGGATGGCTTAGACTATAG 1092 0.4038 MRLMLLSGLVFLVLLLKCVGVKGDTDSDHARNVITWDDFLVDEEGTTSNVGGRVIVVDQSGNGDSTTVQGAVDMVPQNNTQRVKIYIYPGIYRERVNVPKSKPFISLIGKPNITMDANIAAIGNGIGLAIITNSTKASDKDSNGKQMGTISTATVWVQSDFFCATSLTIQNLVDKDADKRQAVALRVDGDKAVFYGVRLVGEQDTLLDNTGIHYFYRSYIQGSVDFIFGNAKSLFQECVLYSVAEFWGAIAAHHRNSEDEDTGFSFVNCTIKGSGRVFLGRAWGNYATTIYSNCDMDDVINPLGWSDWNDPSRQETAMFGEYECSGKGSNRSERVEWSKALSREEAVPFVSRDYIYGDGWLRL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2868 363 Pfam Pectinesterase 55 358 IPR000070 GO:0030599|GO:0042545
Pvu8g2868 363 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Pvu8g2868 363 PANTHER PECTINESTERASE QRT1 23 363 - -
Pvu8g2868 363 SUPERFAMILY Pectin lyase-like 52 361 IPR011050 -
Pvu8g2868 363 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 363 - -
Pvu8g2868 363 Gene3D - 53 363 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2868 Pvu-Chr8 58556188 58559740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2868 3 315 Carbohydrate Esterase AT5G55590 52.226 3.90e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2868 K01051 - gmx:100775690 605.905