Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2854 ATGGGTCAGAGACAGTTGGTCTGCCTTGGCAGGGTTCTGCTTAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCAGTTGATACAGCTACGGATAATTTGATTCAGCAAATTCTTAGGCAACATTTCACTGACTCCACAGTTATTACCATTGCACACCGGATAACTTCAGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGTTAG 219 0.4247 MGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQILRQHFTDSTVITIAHRITSVLDSDMVLLLSQG* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2854 72 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 72 IPR027417 -
Pvu8g2854 72 PANTHER ABC TRANSPORTER C FAMILY MEMBER 3 1 72 - -
Pvu8g2854 72 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 72 - -
Pvu8g2854 72 Gene3D - 1 72 IPR027417 -
Pvu8g2854 72 Pfam ABC transporter 2 27 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2854 Pvu-Chr8 58501113 58501901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2854 2 72 Calmodulin-binding Proteins AT2G36910 36.620 4.00e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2854 - - pvu:PHAVU_008G276500g 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2854 8 58501113 58501901 Pvu8g2854 8 58501113 58501901 ECH
Pvu8g2854 8 58501113 58501901 Pvu6g0564 6 16946966 16953003 PCT