Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2845 ATGGCTGCTTCTATGTCTCTCTATCCCTATAAACCCCTCCTATACTTTTCGACTCCTTTGTGTTTTTGTTCTCAATTTCGGAACTTGGAGAGAGGGCATTTGGGTTCTGCAAGGTTGAAGAGTTTAGTGAAACTTGCAGCACATTCGAATCCGAACATTCTCAAGACCAACAGAAGGTCAAAGTATGGAGAGGCACTGTCTCTGTACGATAGTGATGATGAAGATGAAGAAATGGACGAGGAGGAGGAGGACGACGAAGATGATGATGATGATGATGATGATGATTGGCTTTCTGATGAGGAATTTGCTGAGCCTGCTAAATTTGGTGTTGGTAACAAGAGATTGAAGTCGAAGACAGTTAAAGGAAAAGATAAAGAGAAGGAGTGGGAGTGGGGTTTGAGATCTTTGGACAATGAACAAAGCATTAGATTGCCTAGAAGTGAGAGAGTGGCATCCTTACAACGAAATGAGAGTGGAAAGGTACCATATGGTGATAAGGTTAGTAGAAATGTAAAGAATAAAAAATATCCTCGGTTGTCTGAAGAGATTCCTTTGGATTCGAAATGGTTACCACTTCTTGATTACTTGAGCACCTTTGGAATGAAGGAATCACACTTTATCCAAATATATGAGAGGCACATGCAAGCACTTCAAATCAACGTTGGTTCTGCACAGGAAAGGTTAGAATACTTGATGAGTGTTGGTGTTAAACATAGAGATGTAAGAAGAATCCTTCTGAGGCAGCCACAAATTCTTGAGTATACAGTGGAGAACAATTTGAAGTCTCGTGTTGCTTTCTTGAGAGGCCTAGGCATACCGAATTCTAGAATAGGGCAAATCATTGCTGCTACTCCATCCTTGTTTTCTTACAGTGTTGAGAATTCGTTAAAACCTACAGTTAGATATTTAGTTGAGGAAGTAGGCATCAAGGAAAAAGATTTGGGTAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAAAGAATTGACATTTCATGGAATATGCGTTATATGTTTCTTACCAAGGAGTTGGGTGCACCCAGGGATAGCATTGTGAAGATGGTGAAAAAACATCCCCAACTTCTCCATTACAGCATAGACGATGGATTACTTCCAAGAATAAATTTCTTAAGGAGCATAGGAATGAAAAATTCAGATATCTTGAAAGTATTGACTAGCCTAACACAGGTGCTATCTCTGTCCTTGGAGGAAAATCTAAAACCCAAATATTTGTACTTGGTTAATGAACTTAACAATGAGGTGCAATCCTTGACCAAGTACCCAATGTATCTTAGTTTATCCTTGGACCAGAGAATTCGTCCTCGTCATAGGTTCTTAGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCCCTTGGATCTTTTGTACCAACTGATGAATGTTTTTGCCAACAATGGGCTGGAACAAGTTTGGATAAGTATTTGGCATTCCGTCAGAGATTATTACTTCAAAAGTTTGCTGAGAAATATGAAAGAAAAATGTGA 1506 0.3938 MAASMSLYPYKPLLYFSTPLCFCSQFRNLERGHLGSARLKSLVKLAAHSNPNILKTNRRSKYGEALSLYDSDDEDEEMDEEEEDDEDDDDDDDDDWLSDEEFAEPAKFGVGNKRLKSKTVKGKDKEKEWEWGLRSLDNEQSIRLPRSERVASLQRNESGKVPYGDKVSRNVKNKKYPRLSEEIPLDSKWLPLLDYLSTFGMKESHFIQIYERHMQALQINVGSAQERLEYLMSVGVKHRDVRRILLRQPQILEYTVENNLKSRVAFLRGLGIPNSRIGQIIAATPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNMRYMFLTKELGAPRDSIVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSFVPTDECFCQQWAGTSLDKYLAFRQRLLLQKFAEKYERKM* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2845 501 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 34 493 - -
Pvu8g2845 501 Pfam mTERF 188 448 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 SMART mt_12 315 347 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 SMART mt_12 388 420 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 SMART mt_12 421 452 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 SMART mt_12 207 237 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 SMART mt_12 278 310 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 SMART mt_12 352 383 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 MobiDBLite consensus disorder prediction 65 97 - -
Pvu8g2845 501 Coils Coil 207 227 - -
Pvu8g2845 501 PANTHER CGI-12 PROTEIN-RELATED 34 493 IPR003690 GO:0003690|GO:0006355
Pvu8g2845 501 MobiDBLite consensus disorder prediction 69 97 - -
Pvu8g2845 501 Gene3D Transcription termination factor 3, mitochondrial 252 488 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu8g2845 mTERF 1.5e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2845 K15032 - gmx:102660933 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2845 8 58454830 58457598 Pvu8g2845 8 58454830 58457598 ECH