Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2843 ATGCAAATGTCTCATAAACATAAAATGTCCTATGAGCCTGTCCAAAATTTTGGGTCATGCTGCTTCCTACAAAGTGAGAACCAAGACTACTATTCATCCTCTGATAACAGTGGCCATGCAACCTACCCTTCTGTTCGTACTTCAGAACAATATTGCACCCTGGAATCTTCTACAAAGAACAGTTTTCCTTCCCTTAATTCCCCATCTACTATCAGTTTCTCACCCAACAATAGCCCAGTCTCAAAGCTGCAGCCGAAATCATATGTGTTGAGTTCACAGAATTCTCTTGAAATAGCGAATGATTCACTAGAAAATGAATCTTGTTTGACCCATAATGACAATGAGCTGAGGCACAAGATAAGAGAGCTTGAAAGTGTTATGTTGGGACATGATGCAGATATTCTGGATATGTATGATCCTGTAATTCCAGAGGAATCTGAGTCATTTTTTCTAGAGGCAGAAAGGTGGAAGAAAATGATGGAAGTGATATCTAGAGGGGATTTGAAAGAGATGCTTTGTACATGTGCAATAGCAGTGGCAGGAAATGATATGGAGACAACTGAATGGTTGATGTCAGAGTTAAGGAAAATGGTCTCCATTTCTGGCAATCCAATCCAAAGATTGGGGGCATACATGCTGGAGGCTCTTGTTGCAAGACTTGCCTCTTCAGGAAGCACAATCTACAAAGCCTTGAAGTGTAAAGAGCCTACTGGTAGAGAACTCCTTTCACACATGCATCTACTTTATGAAATCTGCCCATATCTCAAATTTGGGTACTTGTCAGCAAATGGAGTTATTGCTGAAGTGATGAAGGAGGAAAGTGAAATCCACATTATTGATTTTCAGATCAACCAGGGAATACAATGGGTGAGCCTAATCCAAGCTCTTGCTGGCAGACCTGGAGGACCCCCCAAGATCAGAATAACAGGTTTTGATGACTCCACTTCAGCTTATGCCAGAGAAGGAGGCCTTGAAATAGTGGGAGAAAGGTTGTCAACACTTGCACAATCATATAATGTACCCTTTGAGTTCCATGCGTTGGAAGTTTCTCCCACTGAGGTTGAAATTAAGGACCTCAAACTTCGACCTGGTGAAGCTATTGCTGTGAATTTTGCCATGATGCTGCACCATCTTCCAGATGAAAGTGTGGATAGTCAGAACCATCGAGACCGGTTGCTGAGAATGGCAAAGTGCTTGTCTCCAAAGATTGTGGCACTAGTTGAGCAAGAATCACACACCAGCAATCTCCCATTCTTCCCCCGTTTTGTTGAGACAATGAACTACTACTTGGCTATTTTTGAATCAATTGATGTTGCTCTTCCAAGGGAGAACAAAGAAAGGATTAACGTGGAACAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAGTAGCATGTGAAGGGGCAGAAAGAGTAGAACGTCACGAACCTCTCAAGAAATGGAGATCACGTTTCACTATGGCTGGATTCTCACCATATCCATTGAACTCCTTTATAACTTGTTCCATTAAAAATCTTCAGCAAAGCTACCAAGGACATTACACTCTAGAAGAGAGAGATGGAGCTCTATCTCTTGGTTGGATGAATCAAGTTCTTATTACTTCTAGTGCTTGGAGGTGA 1617 0.4187 MQMSHKHKMSYEPVQNFGSCCFLQSENQDYYSSSDNSGHATYPSVRTSEQYCTLESSTKNSFPSLNSPSTISFSPNNSPVSKLQPKSYVLSSQNSLEIANDSLENESCLTHNDNELRHKIRELESVMLGHDADILDMYDPVIPEESESFFLEAERWKKMMEVISRGDLKEMLCTCAIAVAGNDMETTEWLMSELRKMVSISGNPIQRLGAYMLEALVARLASSGSTIYKALKCKEPTGRELLSHMHLLYEICPYLKFGYLSANGVIAEVMKEESEIHIIDFQINQGIQWVSLIQALAGRPGGPPKIRITGFDDSTSAYAREGGLEIVGERLSTLAQSYNVPFEFHALEVSPTEVEIKDLKLRPGEAIAVNFAMMLHHLPDESVDSQNHRDRLLRMAKCLSPKIVALVEQESHTSNLPFFPRFVETMNYYLAIFESIDVALPRENKERINVEQHCLAREVVNLVACEGAERVERHEPLKKWRSRFTMAGFSPYPLNSFITCSIKNLQQSYQGHYTLEERDGALSLGWMNQVLITSSAWR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2843 538 MobiDBLite consensus disorder prediction 59 80 - -
Pvu8g2843 538 Pfam GRAS domain family 169 538 IPR005202 -
Pvu8g2843 538 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 537 - -
Pvu8g2843 538 ProSiteProfiles GRAS family profile. 159 538 IPR005202 -
Pvu8g2843 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 537 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2843 Pvu-Chr8 58445728 58448862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2843 44 538 GRAS Transcription Factor Family AT1G50600 59.082 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu8g2843 GRAS 8.7e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2843 - - gmx:100817120 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2843 8 58445728 58448862 Pvu8g2843 8 58445728 58448862 ECH
Pvu6g0559 6 16853048 16854759 Pvu8g2843 8 58445728 58448862 PCT