Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2839 ATGCTTTTTTCTTCTGGGGTTCAGCAATCGGTTCCCTTCAAGATGCCGTTTGTTACACCTGACCCTTCAGACAAAGATTCTGAGCCCTTTGTTGAGACGGATCCAACTGGTCGCTATGGTAGGTACAGTGAGTTACTTGGGTGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAGGAAGAAGGAATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAACTTCTGTGATGATCCTGCCATGGTGGATAGGCTTTACTCTGAAGTGAGGTTGCTTAGAAGCTTGGCCAACAACAACATCATTGCACTTTACAATGTGTGGAGGGATGACCAGCGCAACACTTTGAATTTCATCACTGAGGTTTGCACCAGTGGTGATTTGAGGGAGTATAGGAAGAAGCACAGGCATGTCTCCATGAAGGCCCTCAAGAAGTGGTCTAAGCAGATTCTGAAAGGGCTGAATTATCTGCACTTGCATGATCCCTGCATCATTCACAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCTGCAATTGTGGGCAAGAACCATTGTGCCCACACGATTCTTGGCACACCAGAATTCATGGCTCCGGAGCTATATGATGAAGACTACACAGAGTTGGTGGACATTTACTCATTTGGCATGTGTGTGCTGGAAATGGTGACAGTGGAGATTCCTTACAGTGAATGTGACAATGTTGCAAAGATCTACAAGAAGGTGTGTTCTGGAGTTAGACCTGCAGCCCTGAACAAGGTGAAAGATCCAGAGGTGAAGGCCTTCATTGAGAAGTGCCTTGCTCAGCCAAGAGCTAGACCTTCTGCAGCTGACCTTCTCAAAGACTCCTTCTTTGATGAGATTGTTGATGATGACGACTAA 921 0.4636 MLFSSGVQQSVPFKMPFVTPDPSDKDSEPFVETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPAMVDRLYSEVRLLRSLANNNIIALYNVWRDDQRNTLNFITEVCTSGDLREYRKKHRHVSMKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTVEIPYSECDNVAKIYKKVCSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAADLLKDSFFDEIVDDDD* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2839 306 Gene3D Phosphorylase Kinase; domain 1 24 121 - -
Pvu8g2839 306 ProSiteProfiles Protein kinase domain profile. 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2839 306 Gene3D Transferase(Phosphotransferase) domain 1 123 303 - -
Pvu8g2839 306 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 15 306 - -
Pvu8g2839 306 CDD STKc_WNK 38 298 - -
Pvu8g2839 306 Pfam Protein kinase domain 43 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2839 306 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 306 - -
Pvu8g2839 306 SUPERFAMILY Protein kinase-like (PK-like) 32 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2839 Pvu-Chr8 58417195 58419752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2839 24 302 MAP Kinase Kinase Kinase AT5G55560 82.796 1.60e-180 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu8g2839 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2839 K08867 - gmx:100816060 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2839 8 58417195 58419752 Pvu8g2839 8 58417195 58419752 ECH
Pvu6g0556 6 16819469 16821727 Pvu8g2839 8 58417195 58419752 PCT