Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2838 ATGCAGAACACAAGAGGTTTTTCTATGTTCATGCTATTTTTCTTTGCTACCCTTTTCTTTATCATAGAATGTACAAGAGGTGAGTTATCAGAATCTGAGTCTTTCTTCAATTTCCTAAGGGCACTTGATCCCCAAAACGTGCTTAATAACACTACCTTAGTTGGATCGCCATCACATTTGTGCTTGGCCAAGTTGAATGGTGTAAGATGTGACTCAAATGCTACCAATATTGTGCACATAAGGCTTGAGAACTTGAACCTTAGTGGCACAATTGATGCAGATTCCCTATGCATGCTCCAAAAGTTAAGAGTGTTGAGCTTGGCCAACAACAACATTAGAGGAACCATTCCACCTTCAATTTTGCATTGTACAAGGTTGACACATTTAAACTTAACCAACAACCAATTGAGTGGGAGGTTGCCAATGGCCTTAACAAAACTGAAAGATCTAAGGAACTTAGACATCTCCAATAACATGTTTTCTGGTATGATTCCTAGTAAACAACAATATAAGAGACTATCTAGTTATTATGTGACACCAAGTGATAAGTTGGAAAACAATAGTACCACAGAGGGGCTAAAAGAAAGTGACACAAACACAATGCAGCCACTGACACCAGATAATTTATCAGACACTGTTTCTGATAATGCCAATGGTTCAAGGAATTGGAAGACTGGAACTTTGGTGGTGTTACTTTTGGGCACTGTGGTTCTTGTGTCATCCTTTTACTTTATGGTGAACAAGTCATCAAAGTTGAATGAAGGGAGAAAGGTAGTTAAAGAGAATCATGATGTGTTAAAGGCTCCACCTAAAGAAGTTCAAGAGGTGAACCTAAAGGAAGGAGATTCTGAGCTTGTTTTCTTTGTTGAAGATCGTGAAAGGTTCACACTGGAGGATCTGCTTCGAGCCACTGCTGACTTGAGGAGTGAAGGCTTTTGCAGCAGCCTTTACAAGGTGAAACTGGAGAACAATGACCACTATGCAGTCAAAAGATTGAAGAATTTGCAGGTTTCCTTGGAAGAATTTGGTGAAACATTGAGGAAGATTAGTAACTTGAAGCATCAAAATATTCTCCCTCTTGTTGGTTATCGTTCCACCAGTGAAGAAAAATTCATCATTTACAAATATCAGAACAATGGAAGCCTACTTAATCTGCTAAACGATTATTTAGCAGGTAGAAAAGATTTCCCATGGAAACTGCGACTGAATATAGCATGTGGAATTGCAAGGGGCTTAGCCTTCCTATATAGGAAGTTAGATGACAAGGAGGAGGTGATTCCTCATGGAAATCTGAAGCCATCAAACATCCTTCTAGATGAGAACAATGAGCCACTGATAAGTGAGCATGGTTTATCAAAATTCATGGATCCAAATAGAGGTTTTCTCTTTTCTTCTCAAGGATACACAGCTCCTGAAAAGAGCCTCACAGAAAAGGGTGATGTATACAGCTTTGGAGTGATTCTCCTTGTTCTGCTAACAGGAAAAAGCATAGAAGTTAGCAGAATAGACCTTGCTAGATGGGTGAGGTCCATGGTGAGGGAGGAATGGACAGGAGAAGTGTTTGACAAGGAAGTTAGGGAGAATGAGCATCAATGGGCGTTTCCTCTTCTGAACATAGCCCTCTCGTGTGTGTCACGTTTCCAAGAAAATAGGCCAACCACTGTGGATATTCTGCAGAAGATAGAGGAGGTCATGGATCAGCATGAACAATATCAGGAACGTTTTGCTTCCAAATGCTGTTCCAATGGATCCAACCGTGATGAGTGTTGTTCACTTCACAAAATCATACCTGAAACATGGGATTCTCCAGGATCAAATTACTGA 1824 0.4019 MQNTRGFSMFMLFFFATLFFIIECTRGELSESESFFNFLRALDPQNVLNNTTLVGSPSHLCLAKLNGVRCDSNATNIVHIRLENLNLSGTIDADSLCMLQKLRVLSLANNNIRGTIPPSILHCTRLTHLNLTNNQLSGRLPMALTKLKDLRNLDISNNMFSGMIPSKQQYKRLSSYYVTPSDKLENNSTTEGLKESDTNTMQPLTPDNLSDTVSDNANGSRNWKTGTLVVLLLGTVVLVSSFYFMVNKSSKLNEGRKVVKENHDVLKAPPKEVQEVNLKEGDSELVFFVEDRERFTLEDLLRATADLRSEGFCSSLYKVKLENNDHYAVKRLKNLQVSLEEFGETLRKISNLKHQNILPLVGYRSTSEEKFIIYKYQNNGSLLNLLNDYLAGRKDFPWKLRLNIACGIARGLAFLYRKLDDKEEVIPHGNLKPSNILLDENNEPLISEHGLSKFMDPNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLVLLTGKSIEVSRIDLARWVRSMVREEWTGEVFDKEVRENEHQWAFPLLNIALSCVSRFQENRPTTVDILQKIEEVMDQHEQYQERFASKCCSNGSNRDECCSLHKIIPETWDSPGSNY* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2838 607 SUPERFAMILY L domain-like 58 167 - -
Pvu8g2838 607 PANTHER OS05G0588300 PROTEIN 13 600 - -
Pvu8g2838 607 Gene3D Ribonuclease Inhibitor 32 202 IPR032675 -
Pvu8g2838 607 SUPERFAMILY Protein kinase-like (PK-like) 296 561 IPR011009 -
Pvu8g2838 607 MobiDBLite consensus disorder prediction 181 216 - -
Pvu8g2838 607 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Pvu8g2838 607 Pfam Protein kinase domain 311 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2838 607 ProSiteProfiles Protein kinase domain profile. 302 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2838 607 Gene3D Phosphorylase Kinase; domain 1 270 376 - -
Pvu8g2838 607 Gene3D Transferase(Phosphotransferase) domain 1 378 586 - -
Pvu8g2838 607 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2838 Pvu-Chr8 58411977 58414494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2838 64 575 Receptor kinase-like Gene Family AT2G36570 33.392 5.07e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu8g2838 Pkinase 8.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2838 - - vra:106763201 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2838 8 58411977 58414494 Pvu8g2838 8 58411977 58414494 ECH