Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2832 ATGCCGAACCAAGATATTTGCAGTCACCTTAAAGAACCTCGTCTTGTAGCCAGAAAGTTTTTGGCCAGACCTCAGCATGAGGGTGTTGGGGCAGTTGTTAGAAGAAGCATAGGGAGATTTGAGCTCAAGAACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTCACTGCTCCAGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGAGCTATAACACATGAAGATTTTGAAGGAAGAAAGGGAACAATTGAAGCTGGTGATTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTCTCCAGCTGTGGATCAACCTCTCTTCAAAACATAAAATGATTGAACCAAGGTACCAAGAAATGCTGAGCAAGGACATAGCAGAAACTATGATAGATGGAATCAAAGTTAGAGTGATAGCAGGGGAAGCTCTTGGAATAAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTGGATTTTTCCCTTAAACCTGGTGCTCACTTGCAGCAACCTATACCAAAATCATGGAATGCTTTTGTGTACATATTGGAAGGAGAAGGTGTTTTTGGGAACCAAAAGTCTCAACCTGTGAATTCTCATCATATACTTCTTCTTGGTTCTGGTGATGGCCTTGAGGCATGTAACAAATCTTCTAAGGTTCTTAGGTTCATTTTGGTTGGAGGGGAACCATTGGGAGAACCTGTGGTGCAATATGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACAATTGATGATTATGAGAATTATACCAATGGATTTGAGAAAGCAAGACACTGGAGATCTGAAAGTGCACTCAGCCTTGATTATTGA 906 0.4249 MPNQDICSHLKEPRLVARKFLARPQHEGVGAVVRRSIGRFELKNFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGRKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKHKMIEPRYQEMLSKDIAETMIDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQPIPKSWNAFVYILEGEGVFGNQKSQPVNSHHILLLGSGDGLEACNKSSKVLRFILVGGEPLGEPVVQYGPFVMNTQEEIDQTIDDYENYTNGFEKARHWRSESALSLDY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2832 301 PANTHER PIRIN-RELATED 4 299 IPR012093 -
Pvu8g2832 301 CDD cupin_pirin_N 31 128 - -
Pvu8g2832 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Pvu8g2832 301 PANTHER - 4 299 - -
Pvu8g2832 301 Pfam Pirin 33 126 IPR003829 -
Pvu8g2832 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Pvu8g2832 301 CDD cupin_pirin_C 176 252 - -
Pvu8g2832 301 PIRSF Pirin 12 292 IPR012093 -
Pvu8g2832 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Pvu8g2832 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2832 Pvu-Chr8 58369887 58373049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2832 13 289 Calmodulin-binding Proteins AT3G59220 59.140 1.29e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2832 K06911 - gmx:100811930 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2832 8 58369887 58373049 Pvu8g2832 8 58369887 58373049 ECH
Pvu6g0532 6 16590397 16593793 Pvu8g2832 8 58369887 58373049 PCT