Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2808 ATGCTTCTTCGGCCACTCTTTCTTCCTCTTTTACTATTTCTCTGTTGTTCTTGTGGCGGTGCAGCCATGGATTGCATGGGGAACAAAATCGTATACACCATTGTAGTTGATCAACAAGGCAAAGGAGAGTTCAGAACCGTTCAAGCTGCCATTGATTCCATAAAGGAAAACAATGATCAATGGGTCAAAATTCACATTAATCCTGGCATATACATAGAGAAAGTTACCATTTCAGAAGATAAAGCATGCATATTTCTAGAAGGCCAGGGCAAAGAGATAACCACCGTTACATCAAGTGGCTACCACCGCGCTGCCGCCGTTACAACTACCTCAAATCAAAATAATCACAAACTAAACGACCACTTGGGTGCTACATTTGTTTCTGTCCCATCCAACGTAATTGTTATCGGAATTACCTTCGAGAATTCGTATAATCTGGTGGGGTCAGAAACCATTGAACCTGCACCTGCAGCAGCGATCTACGGTGACAAATCCGTGTTCGTTGAATGTGGTTTCGTGAGTTATCAAGATACTCTCTTTGATGCAAAGGGTCGTCATTATTTCAAAAATTGCTACATCGAAGGTGAAGTTGACTTTATTTATGGCAACGGTCAATCTTACTACGAGGATTGCATAGTTAATGCTACCCTTGGAAATTCTCCTCCAGGTTTTATAACGGCACAATCTCGAGGGTCTGAAAAAGACCAAAGTGGTTTTGTTTTCAGAACAGGTTGTGTTGTTGGAAACGGGAAAGTGAACCTTGGAAGAGCTTATGGACCTTATTCAAGAGTCATATTTTTTGGAACCTACTTTTCTTCAGTGATTTCTCCTGAAGGGTGGGATGCTTGGGGCTACACTGGCCAAGAGTCCAGGTTTACTTATGCTGAGGTAGATTGCAGTGGAGCAGGAGCAAATAGTACAGGGCGTGTTGAGTGGGTGAAGAAGCTTAGTAATTGGGAATTGGAAGAGTTTTCTTTGTCATCGTTTATCAACCAAGATGGATGGCTTTCCTATTTACCTGTTAAGTTTTAG 1032 0.4196 MLLRPLFLPLLLFLCCSCGGAAMDCMGNKIVYTIVVDQQGKGEFRTVQAAIDSIKENNDQWVKIHINPGIYIEKVTISEDKACIFLEGQGKEITTVTSSGYHRAAAVTTTSNQNNHKLNDHLGATFVSVPSNVIVIGITFENSYNLVGSETIEPAPAAAIYGDKSVFVECGFVSYQDTLFDAKGRHYFKNCYIEGEVDFIYGNGQSYYEDCIVNATLGNSPPGFITAQSRGSEKDQSGFVFRTGCVVGNGKVNLGRAYGPYSRVIFFGTYFSSVISPEGWDAWGYTGQESRFTYAEVDCSGAGANSTGRVEWVKKLSNWELEEFSLSSFINQDGWLSYLPVKF* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2808 343 SUPERFAMILY Pectin lyase-like 32 342 IPR011050 -
Pvu8g2808 343 Gene3D - 27 343 IPR012334 -
Pvu8g2808 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 341 - -
Pvu8g2808 343 Pfam Pectinesterase 34 332 IPR000070 GO:0030599|GO:0042545
Pvu8g2808 343 PANTHER PECTINESTERASE 6 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2808 Pvu-Chr8 58149599 58151535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2808 7 289 Carbohydrate Esterase AT2G19150 44.444 1.79e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2808 - - gmx:100803932 493.041