Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2806 ATGACTTTTTTTCTGGTCTTGGTTACTTGTTCTTTCTTTTGTTTGGGTAAAGCCATAGATTGTGGAGGAAAAGATATTTCAAATACCATCACTGTTAATCCAAATGGGAAAAAAGCATTTACAACAATTCAAGATGCCATTAATTCAGTAAAGAGCAACAATGATAAATGGGTGAAGATTTACATCAAAGCTGGCTTATACAAAGAAAGACCTCAGATTCCCATAGAAAAGCCATGCATCATTTTACAAGGAGAAGGTAGCCAAAATACAATAGTAAGCTTTTCGGCTCACAACGGAACAAGTGATAGTGCTACATTCACTTCATCACCACCGAATGTGATTGTGACCGGCATAACTTTCAAGAACTTATATACTGATTCACCAGCATTAGCAGCAAGAATATACGGAGACAAATCTTTCATCTACAATTGTAGTTTTATGGGTTATCAAGACACTTTATTTGATGCTAGTGGACGTCATTACATAAAAAATTGTTACATTGAAGGTGAAATAGACTTTATTTTTGGTAATGCACAATCATATTATGAGAATTGTGAGATTAAAGCTATAGGGAGAAACCCTAACTTACCAGGCTTTGTCACAGCTCAAGGACGAAGTTCACCTGATCAGCCAGGTGGTTTTGTATTTGAAGGAGGTTCTATTAAAGGAAATGGTAAAGTGAATTTAGGAAGAGCATGGAGACCCTACGCTAGAGTCATATTTCACAAAACATATTTTGATTCTGTAGTAACTCCTCAAGGATGGGTTGCTTGGACTGCCAGTGGCAATGAGAATAGAGTCACTTATGCTGAAGTGGACTGTGAGGGTCCAGGAGCTGATTCTTCAAAACGTGTTTCGTGGATAAAGAAACTAAGTTCTTCAGATTTAAAACAATTTTCTTTTCCAGTTTTTATCAATAATGATGGATGGTTTGATTCCTTACCAACAATATCTTAA 957 0.3615 MTFFLVLVTCSFFCLGKAIDCGGKDISNTITVNPNGKKAFTTIQDAINSVKSNNDKWVKIYIKAGLYKERPQIPIEKPCIILQGEGSQNTIVSFSAHNGTSDSATFTSSPPNVIVTGITFKNLYTDSPALAARIYGDKSFIYNCSFMGYQDTLFDASGRHYIKNCYIEGEIDFIFGNAQSYYENCEIKAIGRNPNLPGFVTAQGRSSPDQPGGFVFEGGSIKGNGKVNLGRAWRPYARVIFHKTYFDSVVTPQGWVAWTASGNENRVTYAEVDCEGPGADSSKRVSWIKKLSSSDLKQFSFPVFINNDGWFDSLPTIS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2806 318 PANTHER PECTINESTERASE 1 317 - -
Pvu8g2806 318 Pfam Pectinesterase 30 307 IPR000070 GO:0030599|GO:0042545
Pvu8g2806 318 Gene3D - 23 316 IPR012334 -
Pvu8g2806 318 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 317 - -
Pvu8g2806 318 SUPERFAMILY Pectin lyase-like 27 314 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2806 Pvu-Chr8 58135524 58144008 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2806 2 264 Carbohydrate Esterase AT2G19150 45.985 1.35e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2806 - - var:108336510 419.468