Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2804 ATGGTTTCATCATCTAATGACTTTCTTCCTGGAAAACATATTTCAAACACCATCACTGTTAATCCAAATGGGAAAAAAGCTTTTAAAACAATTCAAGATGCCATTAATTCAGTAAAGAACAACAATGATAAATGGGTGAAGATTCACATCAAAGCTGGATTATACATAGAAAGACCTAAGATTCTCATAGAAAAGCCATGCATCATTTTACAAGGAGAAGGTAGTCAAAATACACTAGTAAGCTTTTCAGCCCACAATGGAACAAATGATAGTTCTACATTCATTTCATCACCACCAAATGTGATTATAACCGGCATAACTTTCAAGAACTTATATACTGGTTCACAAGCATTGGCAGCAAGTATATACGGAGACAAAACTTTCATCTACAAGTGTAGTTTTATGGGTTATCAAGATACTTTATATGATGCTAATGGACGTCATTACATAAAAGATTGTATTATTGAAGGTGAAATAGACTTTATTTTTGGTGATGGACAATCATATTATGAGAACTGTGACATCAAAGTTATAGGGAGAAACCCTAAAGTACCCGGCTATGTCACAGCTCAAGGACGAACTTCATCAAATGATTTAGGTGGTTTTGTATTTGAAGGAGGTTCTATTGGAGGAAAGGGTAAAGTGAATTTAGGAAGAGCATGGAGACCCTTTGCTAGGGTCATATTTCACAAAACATATTTTGATTCTGTTGTAACTCCTCAAGGATGGGTTGCTTGGACTGCCAGTGGCAATGAGAATAGAGTCACTTATGCTGAAGTGGACTGTAAGGGACCAGGAGCTGATTCTTCAAAGCGTGTTTCGTGGATGAAGAAACTAAGTTCTTCAGATCTAAAACTATTTTCTTTTCCAGTTTTTATCAATAATGATAGATGGTTTGATACCTTACCAACAATATCTTAA 921 0.3529 MVSSSNDFLPGKHISNTITVNPNGKKAFKTIQDAINSVKNNNDKWVKIHIKAGLYIERPKILIEKPCIILQGEGSQNTLVSFSAHNGTNDSSTFISSPPNVIITGITFKNLYTGSQALAASIYGDKTFIYKCSFMGYQDTLYDANGRHYIKDCIIEGEIDFIFGDGQSYYENCDIKVIGRNPKVPGYVTAQGRTSSNDLGGFVFEGGSIGGKGKVNLGRAWRPFARVIFHKTYFDSVVTPQGWVAWTASGNENRVTYAEVDCKGPGADSSKRVSWMKKLSSSDLKLFSFPVFINNDRWFDTLPTIS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2804 306 Gene3D - 11 304 IPR012334 -
Pvu8g2804 306 PANTHER PECTINESTERASE 10 305 - -
Pvu8g2804 306 Pfam Pectinesterase 18 294 IPR000070 GO:0030599|GO:0042545
Pvu8g2804 306 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 305 - -
Pvu8g2804 306 SUPERFAMILY Pectin lyase-like 14 302 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2804 Pvu-Chr8 58123871 58126575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2804 13 252 Carbohydrate Esterase AT2G19150 47.600 3.30e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2804 - - var:108336510 366.311