Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2799 ATGCGGAAGGGAAGAGGAGGGGCCGCGTCGGTCGTCACGGCGGCGGCTGCGGCCGCCAACGGATCCTTTTTAAAGGAGCCTCGGTACCGGGGCGTCAGAAAGAGACCGTGGGGGAGGTTCGCGGCGGAGATCAGAGACCCGTTGAAGAAAGCCAGGGTTTGGTTGGGAACCTTCGATTCTGCCGAGGAAGCTGCTCGAGCCTACGACGCCGCCGCTCGGTCTCTCCGAGGTCCCAAGGCCAAAACAAATTTTCCTCTCACACACCCTTTTTGCTATCCGCACCCCACCACCAATCCTCTCTTCTACGCCGGTTTCCACGACAACAACCACCACAACGGCAGCCTTAACAACCCTCAGAGACCCACCTCGAGCGGGATGAGCAGCACCGTTGAGTCCTTCAGCGGACCGCGCCCTCCCGCCGCCGCCGCCGCCACTTCCATGACGCCGTTTTTGACCACCACGCGGAGATACCCGCGCACTCCCCCTCTTGTCCCCGAAGACTGCCACAGCGACTGCGACTCTTCCTCGTCCGTTGTCGACGACGGCGACAACATCGTCTCCTCGTCGTTCCGCCCTCCCCTGCCCTTTGATCTCAACGCGCCGCCGTTCGACGATGCTTCCGCCGATGACGATCTCCGCTGCACCGCGCTCTGCCTCTGA 660 0.6288 MRKGRGGAASVVTAAAAAANGSFLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAARSLRGPKAKTNFPLTHPFCYPHPTTNPLFYAGFHDNNHHNGSLNNPQRPTSSGMSSTVESFSGPRPPAAAAATSMTPFLTTTRRYPRTPPLVPEDCHSDCDSSSSVVDDGDNIVSSSFRPPLPFDLNAPPFDDASADDDLRCTALCL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2799 219 MobiDBLite consensus disorder prediction 111 184 - -
Pvu8g2799 219 MobiDBLite consensus disorder prediction 111 134 - -
Pvu8g2799 219 Pfam AP2 domain 27 77 IPR001471 GO:0003700|GO:0006355
Pvu8g2799 219 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Pvu8g2799 219 MobiDBLite consensus disorder prediction 170 184 - -
Pvu8g2799 219 PANTHER ETHYLENE RESPONSE FACTOR 4 202 - -
Pvu8g2799 219 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Pvu8g2799 219 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Pvu8g2799 219 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
Pvu8g2799 219 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 202 - -
Pvu8g2799 219 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Pvu8g2799 219 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Pvu8g2799 219 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2799 Pvu-Chr8 58092188 58093372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2799 1 219 AP2-EREBP Transcription Factor Family AT1G50640 59.072 5.29e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu8g2799 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2799 K09286 - gmx:100803943 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2799 8 58092188 58093372 Pvu8g2799 8 58092188 58093372 ECH
Pvu6g0499 6 16171033 16172202 Pvu8g2799 8 58092188 58093372 PCT